Clone FMO04151 Report

Search the DGRC for FMO04151

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:41
Well:51
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13602-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04151.5prime Sequence

387 bp (387 high quality bases) assembled on 2008-08-22

> FMO04151.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTGATTGGTAG
TTTTCCAGTTGGAAAAATTTTCATTCATGGCGTGAAACGGATTAGCAAGC
CATTCGGAGACCTTCTGATTTGGATGGGCAAGCATCATCCCTTTATACGG
CGCTACATCATTATTCCGCCTGCCCAGCTCTACAACACCTTTGAGGTCCG
TTCCAAGCTTCGTATGCTTCGATTAAAGCAGCCCAGGCGGATTCCACCCC
TCTCCACTCCGGTCGCCACCAGATTGGGCGCTGATATGCTGAGTGAGGCT
TTTGTGTTTGGCATCGGCGCGGGTCTCATATACTATGAGCTTTCAAAGTG
TGAACTATTACAAATGTCTGCAAGCTTTCTAGACCAT

FMO04151.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG43999-RB 1159 CR43999-RB 581..913 37..369 1650 99.7 Plus
CG43999-RC 1098 CR43999-RC 581..891 37..347 1540 99.7 Plus
CG43998-RD 597 CG43998-RD 80..390 37..347 1540 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23927974..23928306 369..37 1650 99.7 Minus
Blast to na_te.dros performed on 2014-11-28 22:52:55 has no hits.

FMO04151.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:09 Download gff for FMO04151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43999-RB 581..916 37..373 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:17:48 Download gff for FMO04151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13602-RA 581..916 37..373 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:34 Download gff for FMO04151.5prime
Subject Subject Range Query Range Percent Splice Strand
CG43999-RB 581..916 37..373 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:34 Download gff for FMO04151.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23927971..23928323 22..373 96 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:09 Download gff for FMO04151.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19753693..19754045 22..373 96 <- Minus