FMO04151.5prime Sequence
387 bp (387 high quality bases) assembled on 2008-08-22
> FMO04151.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTGATTGGTAG
TTTTCCAGTTGGAAAAATTTTCATTCATGGCGTGAAACGGATTAGCAAGC
CATTCGGAGACCTTCTGATTTGGATGGGCAAGCATCATCCCTTTATACGG
CGCTACATCATTATTCCGCCTGCCCAGCTCTACAACACCTTTGAGGTCCG
TTCCAAGCTTCGTATGCTTCGATTAAAGCAGCCCAGGCGGATTCCACCCC
TCTCCACTCCGGTCGCCACCAGATTGGGCGCTGATATGCTGAGTGAGGCT
TTTGTGTTTGGCATCGGCGCGGGTCTCATATACTATGAGCTTTCAAAGTG
TGAACTATTACAAATGTCTGCAAGCTTTCTAGACCAT
FMO04151.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43999-RB | 1159 | CR43999-RB | 581..913 | 37..369 | 1650 | 99.7 | Plus |
CG43999-RC | 1098 | CR43999-RC | 581..891 | 37..347 | 1540 | 99.7 | Plus |
CG43998-RD | 597 | CG43998-RD | 80..390 | 37..347 | 1540 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23927974..23928306 | 369..37 | 1650 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:52:55 has no hits.
FMO04151.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:09 Download gff for
FMO04151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43999-RB | 581..916 | 37..373 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:17:48 Download gff for
FMO04151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13602-RA | 581..916 | 37..373 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:34 Download gff for
FMO04151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43999-RB | 581..916 | 37..373 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:34 Download gff for
FMO04151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23927971..23928323 | 22..373 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:09 Download gff for
FMO04151.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19753693..19754045 | 22..373 | 96 | <- | Minus |