FMO04154.5prime Sequence
619 bp (495 high quality bases) assembled on 2008-08-22
> FMO04154.5prime
TTCGCGCAGGATCAACGGCAAGTGCTACTACTTTTCGGTGAAAAAGATGA
ACTGGTTTGGCGCCCTGAACAACTGCCTACGCAAAGGACTGACCCTGGCA
GACTTGAGCAACCAAAGGGACTTCGACGGAGCCATTGGGTTCCTGAGTGG
CCTGGGCAACACGGAGGATTTCTGGTTCGGGGGCAACGATCTGTATCACG
AGGGTCGTTTCCAGTACATCAGCAACGGTCGGTTGGTGCGCTACTACAGC
AACTATAGCAACGTCCTGCCACTGGAGCACTCCGAGTGCGACGACTGCCT
GGAGGTGAGGATCCGCTCCGAGATCAACATGGTGTCGGCAGACAACTGCC
ACGAGCGGCAATACTTCATCTGCTCGGAACGCTACTGCCAGGGCACGGAT
AGTGGCAAGAAGCCGAAGCACCACAGTCACGAGCACTTGCATCACTTCCA
CCACGACATTGGCGGAAGTGCCGAAGGAGAGGACGATGGCGATGGCAATG
GCGACCACGACCGCCAGGACCCCATTGCCAGTGGCTCAGTGGAGCACCCG
GAGCCGGACTCAGAGGATGCATTCGGGGGCGCTCGACGTGCCCGATGACA
ATCAACCCTGTTCAGAATC
FMO04154.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-46Cb-RB | 1039 | CG1652-RB | 101..713 | 4..618 | 2890 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9815703..9816264 | 45..607 | 2645 | 98.4 | Plus |
| 2R | 25286936 | 2R | 9815610..9815652 | 4..46 | 215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:44:58 has no hits.
FMO04154.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:07 Download gff for
FMO04154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Cb-RB | 98..713 | 1..619 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:17:54 Download gff for
FMO04154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Cb-RA | 531..1146 | 1..619 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:19 Download gff for
FMO04154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-46Cb-RB | 98..713 | 1..619 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:19 Download gff for
FMO04154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9815607..9815652 | 1..46 | 97 | -> | Plus |
| 2R | 9815705..9816274 | 47..619 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:07 Download gff for
FMO04154.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5703112..5703157 | 1..46 | 97 | -> | Plus |
| arm_2R | 5703210..5703779 | 47..619 | 97 | | Plus |
