FMO04158.5prime Sequence
637 bp (637 high quality bases) assembled on 2008-08-22
> FMO04158.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGACGATGTGGA
TTGGCCAAAACACCCAGATTCGTTTGGTGCCACTAAAGGATCCGCCAAAG
ACCATCCGATACAGTTTCCTGGCGACCAAGTTCGGGCAGATGATGATGGG
AGTGATAAACCCAATATCCGGCGATTCGAAAGACCAAGTCGCAATTGGTG
TGCTTCACTTCGTGATTAAGGACAATGTGAGTACCTACAATGAAGTCCAG
GAGCGGTGGCCAAAATCCGAACTCTGGAAGGACGATGATGCGGTCAAGTT
GGTGGCGGATAAACTGTTCGAAAGCGACAAGGAAAACTCGCAGGCGATTC
CCATTGCCATCTATGGAACCGACTTCCAGCTGTCCGTATGGCGAGCTCTG
GTGCATATGAAACGAGGGGAGACCTGCACTTACTCCCAACTGGCCGAGCG
GATGGGTCGTCCAACGGCGGTCAGAGCAGTGGCCAGTGCTGTGGCCAAAA
ATGAGCTTGCTATCCTCATTCCGTGCCACCGAGTTGTGTCCCAAAACGGA
GCTTCGAAGTACCACTGGGGCGCAGCCCTCAAGCAACTGCTTCTGGCCGA
TGAAAAGTCAAAGAACTATGCAAGCTTTCTAGACCAT
FMO04158.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:02:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| agt-RA | 693 | CG1303-RA | 79..660 | 38..619 | 2910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:02:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6659441..6660022 | 619..38 | 2910 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:02:17 has no hits.
FMO04158.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:37 Download gff for
FMO04158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| agt-RA | 79..663 | 38..623 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:28:48 Download gff for
FMO04158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| agt-RA | 79..663 | 38..623 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:47:55 Download gff for
FMO04158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| agt-RA | 79..663 | 38..623 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:47:55 Download gff for
FMO04158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6659445..6660027 | 28..615 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:37 Download gff for
FMO04158.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2485167..2485749 | 28..615 | 98 | -> | Minus |
