Clone FMO04163 Report

Search the DGRC for FMO04163

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:41
Well:63
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14505-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04163.5prime Sequence

412 bp (412 high quality bases) assembled on 2008-08-22

> FMO04163.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCTCTCGTCC
AGAGTGATGAAAACGACTTCCATGCGCTTCGAGAGGCGCAAAGGATGGTG
GACTCGTGCCAGGACTTTGCGGACCACTTGATCGTGGCCGAATTTCTACC
CCATTGTCGCGGCGTGGCCTACATCAATATTCGCACCTTGGAGCAGGTCA
TCTATTGTGTGCAACTAAGTCGCGCTGGCTATCGGATCGTGTCCTATGAG
TTCGATGATGTGGCCGATGAGGTGGCCAATTGTGACACTGTCTATGAGTC
CGCCCATCAATTGCTGGCAGGGATAAGTCCGCTGTATGGCGAGAAATATG
GCTTTGGACGAGAGCCACTGGGGAAGCGAAAGGAGAAGCAGTCCGCAAGC
TTTCTAGACCAT

FMO04163.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG14505-RB 956 CG14505-RB 26..382 38..394 1725 98.9 Plus
CG14505-RC 1033 CG14505-RC 26..382 38..394 1725 98.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18303596..18303952 394..38 1725 98.9 Minus
Blast to na_te.dros performed on 2014-11-28 19:45:04 has no hits.

FMO04163.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:12 Download gff for FMO04163.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14505-RC 17..382 26..394 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:18:10 Download gff for FMO04163.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14505-RB 17..382 26..394 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:22 Download gff for FMO04163.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14505-RC 17..382 26..394 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:22 Download gff for FMO04163.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18303596..18303960 26..394 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:12 Download gff for FMO04163.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14191101..14191465 26..394 97   Minus