FMO04167.5prime Sequence
841 bp (841 high quality bases) assembled on 2008-08-22
> FMO04167.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGATTCAGGAACCGA
ACTGGAAAAAGGACTACGACCGTCTGGTCCGCGAGCATTTGAATGATCAG
AATCAGACGAAGTCGCTACAACGACAAATACGGCATTTTCGCTCAAAGCG
CGTACGACTCCAGAATGAAATCGAGGCGGAGAGCAGGAGCATGGACGTTT
GGGTAAAGATGATGGAGAACTTGCACCGCGGAGTGGAGCGCTTTCAGAAG
CACCACCACCTGCTCACGCCCAAAAAGCGCAAGCAGCTGCGCCGCATAAT
GCGAAAGCTGCCCTTGAGCAGTTTGGATGAGCAGGTGCGACTGATGGAGG
TGTCGGAGCGGTTGGTGCCCAAGCCGTGCAAGGAGACTCCTGAACCACCG
AAGGGCAACGAACGCCAGTTCATCAAGTACTCAGTTCCGCATCAGAAAAA
GAACTGTGATCCTAATAATCAATCCCCCGTGGACAAACGGCTGGCCAGGA
TATATGCCAATCTGAAGGCTCTGCTAAAAATCCACGAGCAGACCTCGTCC
GTCATCGCTGATATACATTCCCTGATCGCCACTATTAACTATTTGGAGCG
GGGGCACTGCACCAAGATAAAGATCACTCCAGCGGAGGGCTCCAGGCCGT
CAATAAAGGCTACCATCGAATTGGATCGGCTGCGCAAGACCAAGCACGGC
AACCACTACACGCGGGAAATTATGGACGTACGTCCTCCGTACATCCTTGA
CCATGTGCCGCAATTGAAACCAAACATTTTCGACGCTCTGGGGAGAAAGG
CGAAAAAATCAAAATCCAAGCACGCAAGCTTTCTAGACCAT
FMO04167.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5478-RA | 1035 | CG5478-RA | 49..837 | 35..823 | 3945 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15932898..15933686 | 823..35 | 3945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:00:34 has no hits.
FMO04167.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:16 Download gff for
FMO04167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5478-RA | 39..849 | 21..834 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:18:18 Download gff for
FMO04167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5478-RA | 39..849 | 21..834 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:38 Download gff for
FMO04167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5478-RA | 39..849 | 21..834 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:38 Download gff for
FMO04167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15932886..15933696 | 21..834 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:16 Download gff for
FMO04167.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11758608..11759418 | 21..834 | 98 | | Minus |
