FMO04176.5prime Sequence
839 bp (839 high quality bases) assembled on 2008-08-22
> FMO04176.5prime
ATAGCATACCTTATACGAAGTTATCAGTCGACATGACCGACCATTCAGCC
CATCCAAACGAGGAGGAGGTGATCGGGGACATCTACTTGTCCCTACTCTC
GCGACATGCCCACAGATATCCGGAGGATGGAAGCCACAAGTCGTGGATCC
TTCCGCGCATGATGGTTCTGTTCGCCAGTGGGGATATGGATCAGGTTATA
GAGGCCATAGTCTCGGACATGATCCATCCGATTGGAACTGGACTGGTGGC
CAGTGTTCTGGTCGAGGAGTCCATACGGGACGAGATGATTAAGAGAATAC
GAGCCAACTTGAAGCCGATGAGCGAGCGCATCCAACACCATCCCAATTAC
CTGAAGACAGTGAAGCTCATCGATCGAATGAACTGCTCCACCATTCACAT
CGAGGAGTTCGAGGAGTCGGATACGAAGAAGCGTTATGGTCGCCGGATGA
AGGGATCCCCTTTGATAGTCTTGGATTTCCCCCAATTCTATTTCGGTGGC
AAGCCCACGGCCATAATGACTATGAGCACCTTTCGCAATATGAATGAAGT
GGTTAAGTTGCATTCGCGCGAAGGTCTGAATTTCGACTGTATTACCGTGT
GGTCAGCCAAGTTGGCCCAGTGCTTCGACCTGCTCACCAGAGTGCCCACG
GTGGACCAGTGGACCTTCAACTGCACCAAGGAATCCATCAAGGTTCCAAA
ACTGCCAGCTCAACCGACCACCACAGTTATAATCGTTAAGAACATTCACT
ATGAAGTCCACGTCATTGGCGGGAAAGATCAAAACTATAGCGTTTCCAAT
CGTAGATACTTCTGCAAGCTTTTCTAGACCATTCGTTTG
FMO04176.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13539-RB | 1099 | CG13539-RB | 278..1057 | 33..813 | 3835 | 99.5 | Plus |
| CG13539-RA | 881 | CG13539-RA | 60..839 | 33..813 | 3835 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23184467..23185246 | 33..813 | 3810 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:30 has no hits.
FMO04176.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:25 Download gff for
FMO04176.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13539-RA | 60..845 | 33..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:18:36 Download gff for
FMO04176.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13539-RA | 60..845 | 33..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:51 Download gff for
FMO04176.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13539-RA | 60..845 | 33..820 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:51 Download gff for
FMO04176.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23184467..23185252 | 33..820 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:25 Download gff for
FMO04176.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19071990..19072775 | 33..820 | 99 | | Plus |
