FMO04182.5prime Sequence
883 bp (883 high quality bases) assembled on 2008-08-22
> FMO04182.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTGGCAAGGACA
CAAGGAAAAACCCACTTCCACCCGTTCGATGGCCAGGGAAGTAGTCCACC
CTGAGAGGCCTTTGCCGCCGTGGAGTCGTCTTCTGGAGCACAATGCCGAA
GGTTGTCTGCGGAAGAGAAGTGGGGAAAAGGAGGAGCACTACGAGGTGGA
GATCTCCAACCACTTGTGGTCACTTTGGGGCAGCACACAGCAAGTGAAAC
CAGGGGAAAATAGTTCCTCGTCGGAGTCCGGATCCGAAAGGACCTCACCT
CCTGGTCAGGCATTGGCATGCTGCGTGTTAGCCTGTTGTGCAGGCAGTTT
TCAGTCCTTGGATTCCTGGAACTCCAGTGCGCTGGACAAGATCATGTCGA
ATGGGCGGGGCTACTATGACGAAAGCTTGGCGACCAGGCAACATTGGGAT
CGTACAGGAGAGCTCTGTCTGGAGTGCTTGAACACCACCTGCTTCCTTGA
TGGTCACGAGTTTTGGGTGGACATCGAAAAGCTCTGTACCGGTAAATTGT
ACAGCAGAACCAAGAGCCTGGGATCCGCACTGAGTAAGTTCTTTGGCCAG
CACTTGCAAAACGGGAATTCTTCAGCTTAGGGATCAGGCTCTGGCCTTTG
GGTTTATCCCAGAGTTCGCCTCCGGCGGAGCCTTCTTCCTCTTCCACTGC
CAGGCGAGGGGAAGGCCGCTTTTCAAGGACTGCGAAAGTGCCCCGTATGT
GCTGAGGATGCGAAAGCTGCAGCAACTGCTCTACTGCATGCTCATCACAT
TGGACGAGAGGCGCCACAATGTGCCCTTCAGGATCTACAAGGTGGGATGT
GTGCCACGTGCTAATGCAAGCTTTCTAGACCAT
FMO04182.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14402-RB | 1020 | CG14402-RB | 83..914 | 33..865 | 4050 | 99.2 | Plus |
| CG14402-RA | 1688 | CG14402-RA | 83..914 | 33..865 | 4050 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20849382..20850213 | 33..865 | 4025 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:26 has no hits.
FMO04182.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:46 Download gff for
FMO04182.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 79..919 | 29..872 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:18:25 Download gff for
FMO04182.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 22..862 | 29..872 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:26 Download gff for
FMO04182.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14402-RA | 79..919 | 29..872 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:26 Download gff for
FMO04182.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20849378..20850218 | 29..872 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:46 Download gff for
FMO04182.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20849378..20850218 | 29..872 | 98 | | Plus |
