FMO04185.5prime Sequence
1084 bp (810 high quality bases) assembled on 2008-08-22
> FMO04185.5prime
CTTACCCACCAAATCTTAACCATGCAACGCGCACCACCACTGAATTTGAG
CTTCAAGATTCAGCTGCTGTCCGGCCAAAATGTTATCCTGGTGGAGTGTT
CTGGCTACGAGAGCGAGCTGTTCTTGCCGCAAATCGTTGGGGAGCGAATC
ACCATGCAGAACGTTATTCAAGATCGAAGGTGCTGTGCAGAGAGCATGTT
GTTGCGGGATCCCCCGATGGGCGATTTGGGCTCCGAAACCAGGACTGCGA
AGAGTCCTCCACGGCGCTTCTTTGCCGCTGCCAATCCCCCAACCCCACTG
GCCAAGAGCACCCCGACGAATACATCTTCTTTAAGAGCTCGGGCTGGTAA
GGAAAACGCTGTTCCGCAGCTAACGCCAGAGGGTTTGCGATGCCGACCCT
TTCACCTACCTGCACCGGTGGAAATGGACGTAGACCAATTGTGCTGCCAG
GAGCAGACACCTGAGAGACGGGCATCCTCCAAGTCTATAAGTTCAGCTAA
TACAAATAATAGTTTTTTTGAGAATGAGGTATCACAGCCAGTAATTTCAA
GCAAGAACGTCTATGCCAACGAATCGGCCCGTAACAACATTACGCCCTCA
AGCATCTATGAGACTGGGATCTCACCGCCAGTCTTGCCGAGAGAGAATCT
AACCGAGCAGAACCACCAAGCGATGGAACTCGCCATCAACAAGACTAAGC
CCAATTGACCGCCGTCCGGACATAATACTCGTAACCGAGTGGAACCGCCA
GCAAAGCAAGGCCACACCAGTGTGGTCTTCCTCTTCAGAAAGAAGAAAAG
AGCTCGTGGGGTATCATCCACCAAGGTGTCGTCTTCCCACCATGAAGGTG
GAAAGTGCGTAATCCGCAACCTGATAGTTGACCACAAAAAGACGCTGCCT
GTCATGATCCTAGAAATTGTCTCGGGTTCTTCCACATGAAGAAAATAATA
GGGAGCAGTGATGGGAAAGACTCGAATGCATTTGGAGCCCTCAAGGCCAA
GCTTTGGATATTAACTATTGCGTGTTATACATTCGACGATCTACCAGCAA
TCAGAAGGCCTGTGCGAAGGGTGGTCCATACTTG
FMO04185.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8712-RB | 1693 | CG8712-RB | 174..1258 | 1..1068 | 4330 | 94.7 | Plus |
| CG8712-RA | 1489 | CG8712-RA | 115..1199 | 1..1068 | 4330 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8097398..8098311 | 916..1 | 3920 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:46:04 has no hits.
FMO04185.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:28 Download gff for
FMO04185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8712-RA | 115..1093 | 1..976 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:18:50 Download gff for
FMO04185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8712-RB | 144..1122 | 1..976 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:23 Download gff for
FMO04185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8712-RA | 115..1093 | 1..976 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:23 Download gff for
FMO04185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8097333..8098311 | 1..976 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:28 Download gff for
FMO04185.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3984838..3985816 | 1..976 | 96 | | Minus |
