FMO04186.5prime Sequence
611 bp (611 high quality bases) assembled on 2008-08-22
> FMO04186.5prime
CCTATACCAAGTTATCAGTCGACATGTTTGCCGGTCGTTTGATGGTCCGT
TCGATCGTTGGTCGGGCATGCTTGGCCACCATGGGCAGGTGGTCAAAGCC
CCAAGCACACGCCAGCCAAGTGATCCTGCCCAGCACACCAGCGATAGCCG
CAGTTGCTATTCAATGCGAGGAATTCACTGCCAACCGGCGATTGTTTAGC
AGTCAAATTGAGACGGAATCCACATTGGACGGCGCCACCTACGAGCGTGT
GTGCTCCGACACCCTGGACGCACTGTGCGACTACTTCGAGGAGCTGACGG
AGAACGCCTCCGAGCTGCAGGGCACGGATGTGGCTTACAGCGATGGCGTG
CTAACCGTGAACCTGGGAGGACAGCACGGCACCTATGTGATCAACCGGCA
GACGCCCAACAAGCAGATCTGGCTCAGTTCGCCCACCAGCGGTCCCAAGC
GATACGATTTCGTCGGCACTGTGGCGGCGGGCAGATGGATCTACAAGCAC
AGTGGTCAGTCGCTGCACGAACTGTTGCAGCAGGAGATACCCGGCATACT
GAAGTCACAGTCCGTGGACTTCCTACGCCTGCCCTACTGTAGTGCAAGCT
TTCTAGACCAT
FMO04186.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fh-RA | 923 | CG8971-RA | 60..629 | 24..593 | 2835 | 99.8 | Plus |
| fh-RB | 927 | CG8971-RB | 60..633 | 24..593 | 2785 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9148694..9149012 | 342..24 | 1595 | 100 | Minus |
| X | 23542271 | X | 9148374..9148625 | 593..342 | 1245 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:23:03 has no hits.
FMO04186.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:08 Download gff for
FMO04186.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fh-RA | 60..634 | 24..601 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:18:51 Download gff for
FMO04186.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fh-RA | 48..622 | 24..601 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:29 Download gff for
FMO04186.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fh-RA | 60..634 | 24..601 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:29 Download gff for
FMO04186.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9148369..9148625 | 342..601 | 98 | <- | Minus |
| X | 9148695..9149012 | 24..341 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:08 Download gff for
FMO04186.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9042402..9042658 | 342..601 | 98 | <- | Minus |
| arm_X | 9042728..9043045 | 24..341 | 100 | | Minus |
