FMO04192.5prime Sequence
1114 bp (1059 high quality bases) assembled on 2008-08-22
> FMO04192.5prime
ATAGCATACCTTATACGAAGTTATCAGTCGACATGCCCTATCTATATGGA
ATAGCGGACACCAAGTTCCTCCACCAGAAGGTGAAAAAGAAGACAAAGAT
CCGTTCGGATATGGCACCCACCAAGTTCCAACGGAATGAGTTCCTAAAGG
GCTGTCCCAAGTACGATGGGGACGATATACCCATACAGTTCAGGACGACA
CCCGATTCTCTCGTGGAACTGAGCATCATTGTGGTGGACAAGCTGCCATT
GCCTTCGATATTCGAATGGGATGACATGGACATCAGGCGCTGGATCAATG
GCTACGGATATCCACAGTACATGAACACTTTCCGGGTGAACATGATCACG
GGTCGCAAGCTACTGCTCCTGGACGCCTCCGCTCTGTGTGCGATGAACAT
CAAGAATTTCGATCACATCCGTCACATATCCTATGGCATCCGTATGCTCT
TCCACTTCGAGCTGACGAAGTTCTCATCCAGCATCTCGCTGCCGGACGAG
AAGCCCAATGAGCTGTACCTGCTGTTCCACACGCAGACCGGAGTAAACTA
TGACGAGGTGCGCAGGAGTGATCTCTACCGACGGATGCAGATGCTACGGG
AGCGGGCCCGCAACCTGGACCACTGGGATCTACTGTACCTGTGGCTGCGC
CACGAGCAGGAGCGCAAGTACAAGGAGCTCATCGGCATGGTACCGCGCTT
CACGATGTACAAGTGCGAGGAGGCGGCAAAGCCGCCGGAGGAACCCGAGG
ACATGGAACCCGAGGAACTCATGTGCATGACCTGCATTCCGCCGTGCGAC
TGCGACTGGACCGCACGGGATCTCCGGCTGCCGTGGCGATTGGAGTGCCT
GCCGCCCATGCTGGAAACCACCATGAGCAAGTGGAACGCCTTGCAGCGCA
GTGCTCCACCTGCATCCCGCCGTGCGAGTGCCGCTGGCCACCGCGATTCT
ATCTCACGGGCACCGTCATTCGCTGCTGCAGCAGCGGTTCCCGGAGAGTC
TGCCCCATCTTCGACGAACGGTACAGGCTCGCCGCGACCAGTCTCGTGAA
GCGCTGACGCGATTCTCCATTGCAAGCTTTCTAGACCATTCGTTTGCGCG
CGCGCCAGGTAGGT
FMO04192.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15625-RA | 1222 | CG15625-RA | 83..1129 | 33..1071 | 5030 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4890428..4891184 | 323..1071 | 3425 | 98.7 | Plus |
| 2L | 23513712 | 2L | 4890077..4890367 | 33..323 | 1455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:26:21 has no hits.
FMO04192.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:32 Download gff for
FMO04192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15625-RA | 83..1135 | 33..1077 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:18:58 Download gff for
FMO04192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15625-RA | 83..1135 | 33..1077 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:25 Download gff for
FMO04192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15625-RA | 83..1135 | 33..1077 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:25 Download gff for
FMO04192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4890077..4890367 | 33..323 | 100 | -> | Plus |
| 2L | 4890429..4891190 | 324..1077 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:32 Download gff for
FMO04192.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4890077..4890367 | 33..323 | 100 | -> | Plus |
| arm_2L | 4890429..4891190 | 324..1077 | 98 | | Plus |
