Clone FMO04202 Report

Search the DGRC for FMO04202

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:42
Well:2
Vector:pMK33-CFH-BD
Associated Gene/Transcriptfan-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04202.5prime Sequence

694 bp (694 high quality bases) assembled on 2008-07-30

> FMO04202.5prime
CCAAAAAAAGTTATCAGTCGACATGTCCGACAATACCGAGAGCTAACTTG
CGCTAGACCCGTGCGATGTGATCGTCTTTGAGGGACCATTCAACCGCTCG
GTGAGCAGGAAGCTAGTCATCAAGAACACCAGTAAGACCCAGCGAATGGC
CTTCAAGATGAAGACCACCACTCCAAAACTTTTTTATGTACGCCCCAACA
TCGGTGTCTTGGGGCCCGAGCAGAAGGTCAGCGTTGACATATTCATGCAG
CCAATTCTGCAGGAGCAGATAAAGAAGCGTCATAAGTTCCTTCTCCTGGC
CGCCGAGGTGACTGGTGACATAAGCGATGTGCAGGAGTTTTGGAAGATGC
AGAACCCGAATGAAACTCGGGAAACCAAGATCAAATGTGAGCTAGTCCCT
TCGAAGGAGGACGATTTCCGTCAGGCGGGAGGTTCAGCTGTAATATCCAC
GGACAACAAGGACGGAGAGGTCCATTTTGATGCCCAGGAAGTCAGTGAGC
CAATGGCCAAGTTGCTCAAGCAAGTCAGCATGCTGGAGGACGAGCATATG
GCCCTCACAGACCAGATCGACGGCTTGCGTGACCAGGCGATTGGGCGCAC
TTTCTTCTACATGGCCGCCATAATAATCATTATACTGTCCGCTGTCGCAG
GCGCCTATTATGGCAAGACTCGTTTGGCAAGCTTTCTAGACCAT

FMO04202.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
fan-RA 912 CG7919-RA 147..800 23..676 3240 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8109278..8109931 23..676 3240 99.7 Plus
Blast to na_te.dros performed on 2014-11-28 23:14:14 has no hits.

FMO04202.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:14:52 Download gff for FMO04202.5prime
Subject Subject Range Query Range Percent Splice Strand
fan-RA 147..806 23..684 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:04 Download gff for FMO04202.5prime
Subject Subject Range Query Range Percent Splice Strand
fan-RA 110..769 23..684 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:05 Download gff for FMO04202.5prime
Subject Subject Range Query Range Percent Splice Strand
fan-RA 147..806 23..684 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:05 Download gff for FMO04202.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8109272..8109937 18..684 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:14:52 Download gff for FMO04202.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8102372..8103037 18..684 98   Plus