FMO04204.5prime Sequence
714 bp (714 high quality bases) assembled on 2008-07-30
> FMO04204.5prime
ACTTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGATAGCGA
GCTGAACGGATCGGAACTTGGCACCAAGGAATTTTGGGAGTCCAGCTACA
ACCGGGAGATACGAAACTACAAGAGCCACGGCGACGTGGGCGAGATCTGG
TTTGACGAAAGTGCCCAATGGCGAACGATCGACTGGCTGCTTAACGAGGA
GAAGATCGACAAGGAGGCGAGTCGAGTGCTGGACCTGGGCTGCGGCAATG
GCATGTTCCTAGTGGGCCTGGCAAATGAAGGCTTCACCGGAGACCTGACC
GGCGTGGACTACTCTCCCAAAGCCGTCGAGCTGGCGCAAAACATTGCGGA
GGATAACAAGCTGAGCATCACATACAAGGTGGCGGACTTAACCCAGCCGC
AGAACGAGCTGGGCCAATTTGACGTGGTGCACGACAAGGGAACCTACGAT
GCAGTCAGTCTTTGTCCGGATAATGCCAAGGAGAAACGTGCTCTCTACCT
GGACACGGTGGAGAAGTTGCTGCGAACTGCTGACAGCCTGTTTGTAATCA
CGTCGTGCAATTGGACCGAGGACGAGCTGGTGGATAGCTTTGCCGAGAAG
TTTGTCAAGTACTATACCATTCCCACGCCGACCTTTAAGTTTGGCGGCAA
GGTGGGCAATGTGGTAACCTCAATTGTTTTCAAAAGGAAAAAGGAAGCAA
GCTTTCTAGACCAT
FMO04204.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9643-RB | 878 | CG9643-RB | 84..740 | 40..696 | 3270 | 99.8 | Plus |
| CG9643-RA | 763 | CG9643-RA | 84..740 | 40..696 | 3270 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2978549..2979205 | 696..40 | 3270 | 99.8 | Minus |
Blast to na_te.dros performed 2014-11-28 19:52:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 3206..3232 | 687..713 | 108 | 88.9 | Plus |
FMO04204.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:51 Download gff for
FMO04204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 84..743 | 40..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:50:12 Download gff for
FMO04204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 206..865 | 40..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:53 Download gff for
FMO04204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9643-RA | 84..743 | 40..700 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:53 Download gff for
FMO04204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2978545..2979211 | 32..700 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:51 Download gff for
FMO04204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2978545..2979211 | 32..700 | 98 | -> | Minus |
