FMO04208.5prime Sequence
1253 bp (963 high quality bases) assembled on 2008-07-30
> FMO04208.5prime
ATAGCATACATAAAACGAAGTTATCAGTCGACATGATGACGGAAAAGATA
CGGAAGAGCAGCCTCAGTGGCTATACGGTGATACTTCTACTGGCTGCTAT
TCAGTTCCAAGCAAGTGTAGTGTCCAGCACGACAACCAAACCGCCATCGA
CATTGGCCACATCCACGAAAGCTAGTCGCAATGTGAATCCCCTGACGGAG
TCGAAGCTCGAGAAGAATTGCAAGGCGCTGTGTGAGCATTGCGGCTGTTT
GGGCTTCTACTGCGGCGAGGAGTGCCTGTGCGAGTGTAATGACGACCAAT
CCGATACTGAGTGCATTCGCACCATGCAGATGAATGCCAAGACGTTGAAT
CTACCATTCGAAATCGTCATCCAGGGACCGAGCAGCAATCGGTTTGTGCG
CAACGCCCAGCAGTTCGAGCAGAAACGAGATCTGGTGGCCAGGAGCGCCA
GCACTTCAATGCAGTCGCCTCGAAATCGTCGCTCAAACATAACCATCTAC
AAGCCCTCCACAAAGTTGGTCATTCAACGTACGGCCAATGGCTTAGAAAC
GCCATCCAAGGCTTCGGAGCAGATAAGGCACAAGAGGTCCGTCGATCACC
TGGAGTGGTTCAATGACTTTGCCAGTTCCTTGGTGCGTCCCTCGCCACTG
GGCACTAGAGCCCAGAAGCAGCAGCGTGCATCAGCCAAGCCATCGGCATT
CAAGCGTCAGGCTGAGCTGGAGGAGCCGGCTCGTCGGGAACCATGGTTCC
TGGAGCAGTCAGCTTCGCGACTGACTCGCCCCCGCTCCACTTAAGAAGGA
TGCACTCTCGCGGAAGAACAAGAAGAGTCCTTTGTTCCGAAAGAGCGCCA
GAGCAAGGCGTCAAAGGAGCAGTCCGCGCAAGCAACCGGAGCGAGAGATT
CCGGCCACTTCCGCGATGCTTGCAGGTGGTGGAGCGGATAACCCAAAGTG
CTTTCAAGATACGGTCCGTTCATCTGTTCCTCCGATCCACGCACTGGGGG
ATGTCTTTAACCCTGGAATATTAGAAACGAGGGATGGTGCTGCAAAAAAG
GATCGACAAGCCTTGAGGATCGTGTGTGCCACGCAGGCCTTCGGCCACCT
TTCGGTGGTTTCCGGACGCAATGAAAATCAATTCCCCGAAAGCCCGTACC
CTTGGCTGCCCCCATTGACCTTGACCCATCAGCTCCATTCCGGCAAGCTC
CAGGTGGACTTCCGGCGTGCCCGTGGCTTAAGAGGCATGCGCGCCACAGC
ATG
FMO04208.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14834-RA | 1426 | CG14834-RA | 79..1238 | 33..1210 | 4845 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7346055..7347045 | 1032..33 | 4275 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:09:13 has no hits.
FMO04208.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:46 Download gff for
FMO04208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-RA | 71..1122 | 25..1090 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:42:39 Download gff for
FMO04208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-RA | 71..1122 | 25..1090 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:19 Download gff for
FMO04208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14834-RA | 71..1122 | 25..1090 | 96 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:19 Download gff for
FMO04208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7346002..7347058 | 19..1090 | 96 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:46 Download gff for
FMO04208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7339102..7340158 | 19..1090 | 96 | -> | Minus |
