FMO04210.5prime Sequence
486 bp (486 high quality bases) assembled on 2008-07-30
> FMO04210.5prime
TATAATACGAAGTTATCAGTCGACATGTCCGAACTAACGGAGGAGCAGAT
TGCCGAGTTCAAGGATGCCTTTGTCCAGTTCGACAAGGAGGGAACCGGCA
AGATCGCCACCCGTGAGCTGGGCACATTGATGCGCACCTTGGGCCAGAAT
CCAACGGAGGCCGAGTTGCAAGATTTGATAGCTGAGGCCGAGAACAACAA
CAATGGCCAACTGAACTTCACTGAGTTCTGCGGTATAATGGCCAAGCAAA
TGCGGGAAACTGACACTGAGGAGGAAATGCGTGAGGCATTCAAGATTTTT
GATCGTGATGGCGATGGCTTTATATCACCAGCTGAGCTTCGCTTTGTGAT
GATCAATCTGGGCGAAAAGGTCACCGACGAGGAGATCGATGAGATGATTC
GCGAGGCTGATTTTGATGGGGATGGCATGATCAACTACGAGGAATTCGTA
TGGATGATAAGCCAGAAGGCAAGCTTTCTAGACCAT
FMO04210.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acam-RB | 1224 | CG17769-RB | 734..1177 | 25..468 | 2220 | 100 | Plus |
| Acam-RA | 596 | CG17769-RA | 106..549 | 25..468 | 2220 | 100 | Plus |
| CG17770-RA | 1224 | CG17770-RA | 734..1177 | 25..468 | 2220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25812644..25813087 | 25..468 | 2220 | 100 | Plus |
| 2R | 25286936 | 2R | 12269339..12269412 | 346..419 | 205 | 85.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:01:55 has no hits.
FMO04210.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:30 Download gff for
FMO04210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17770-RA | 725..1177 | 13..468 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:01 Download gff for
FMO04210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| And-RA | 97..549 | 13..468 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:46 Download gff for
FMO04210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17770-RA | 725..1177 | 13..468 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:46 Download gff for
FMO04210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25812635..25813087 | 13..468 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:30 Download gff for
FMO04210.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21638357..21638809 | 13..468 | 98 | | Plus |
