Clone FMO04211 Report

Search the DGRC for FMO04211

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:42
Well:11
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13186-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04211.5prime Sequence

481 bp (481 high quality bases) assembled on 2008-07-30

> FMO04211.5prime
GTATAGCATACATAAAACGAAGTTATCAGTCGACATGCCACCAAAGAAGC
CGGCAAAAAAGAAAAAGGACGTGGACTGGTCCTCCGATGAGCATTTCTCC
AAGGATCGTTCCATGATCTACATCGAGCACACGTACGAGTGTCCCATTTT
CCAGACCAAGGCCGACGAGTGCGGAACATTCTTCACGCAACGGATACCGG
AGCGCAAGTTCCAGCTGGTGAAGAATCGAAACGGACGCCAGGTTCCGCGG
GAAGGAGCCTTCGAGATAGGTTTCTCGCAAAATGCACGCACCTCGGAGCA
TCTGCTGTGGTCCGGCTTGGAGAAGGGACCGCCGCGTCGGGATAAGTTCC
CACTGGACTACGAGGCACTGGTGCCCGATGTGAACAGGATACTCAAGAAA
TTCTATCCCGACAAGGCGGTGGGCGTGGACGCTGACGACGGAGATGAGGA
GAAAGAGGACATGGCAAGCTTTCTAGACCAT

FMO04211.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG13186-RA 782 CG13186-RA 43..471 35..463 2115 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12081318..12081746 35..463 2115 99.5 Plus
Blast to na_te.dros performed on 2014-11-28 19:47:53 has no hits.

FMO04211.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:40 Download gff for FMO04211.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 39..479 27..472 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:02 Download gff for FMO04211.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 39..479 27..472 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:35 Download gff for FMO04211.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13186-RA 39..479 27..472 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:35 Download gff for FMO04211.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12081314..12081754 27..472 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:40 Download gff for FMO04211.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7968819..7969259 27..472 97   Plus