FMO04220.5prime Sequence
810 bp (810 high quality bases) assembled on 2008-07-30
> FMO04220.5prime
TATAGCATACATAAAACGAAGTTATCAGTCGACATGAGTATGATACAAGA
AGAGACCAAGGCCAGCGTAATCAGCGTGGTAAAGCCGCCACCGAGTTGGG
TGGAATGGTGCGAGCGGAATGCCAAGCCGATCGAACGTCGGCTCATCAAG
GAGAGGCGCTATCTAACCAGATGGCAAATTCCCGGACCGATGAAAAAGGC
ACAGTGGAGGGAGTTCTACGAGTGGGCAGCCTCCAGAGCCATGCCAAAGG
AACTACCGGTGCCGGTCAAACAGCCCATACCCTGTGTTGACAAGTTCTTG
CCATGCGCCAGAAAACCACGCGCAATCGATCCGGACGAATTTCAGGAGAA
GGTCGCCAAGTTGGCCACGCCACTGGAACGGAAAATGACGCCGAAGCATC
AGTACATCTATCCGGTCCAACCGTACTCCCCAATAATTGTCTGGGGTCAG
CCGCCACTCCATGACAAAGGACGACCCTTTAAGCCCCCTCAAAAACCCTG
CTGCTTCTTCAATGCCGACATCGAGGACAAATGGTGGGCCGAACTGCGCT
TTCCCATCCGCAAGGCTGCTCTCAAAGCCAGGATAACTCCGCGCATCCTT
AGCCTGTCGAAACCAAAGATCACGCCTCAGTTCCCACCGCATTGCTATCA
TCCGGAGCATATATATGACGTGCTTAATGTCAAACCGCCACGGAGGAAGA
AGTTTACTCCCCAGGGATGGCGTCTCCACCAGATCAGATTGCTATATCTT
TCGAAGCCTGTGTCCCGGCCCGAATACGAGTATTTTTATATGGCAAGCTT
TCTAGACCAT
FMO04220.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3581-RA | 1033 | CG3581-RA | 131..890 | 33..792 | 3800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19373900..19374659 | 792..33 | 3800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:23:43 has no hits.
FMO04220.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:08 Download gff for
FMO04220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3581-RA | 121..893 | 24..796 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:50:24 Download gff for
FMO04220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3581-RA | 81..853 | 24..796 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:30 Download gff for
FMO04220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3581-RA | 121..893 | 24..796 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:30 Download gff for
FMO04220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19373897..19374669 | 24..796 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:08 Download gff for
FMO04220.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15199619..15200391 | 24..796 | 99 | | Minus |
