FMO04227.5prime Sequence
924 bp (924 high quality bases) assembled on 2008-07-30
> FMO04227.5prime
TTCGTATAGCATACATAAAACAAAGTTATCAGTCGACATGTCCTCGCCCA
CAGATTTCGACCGTTCCATGCTGGTGGAGTACAGTGCCGCATTTATGTAC
TACATTGAGAAGCACAAGCTGATGGAGGTGATGAGTCGTCTCCTGGCCGA
GATTTCCGTGGCGGATGGAGTGACAGATGTGCGAAGATGGATGGGCGAGA
ACATAACCAGGATCGGCGTAGAGATATACACCAAATCGATGGACGCCTTT
CATCGGGGAGTAAGGGGTGATTTCTACCAGCTGCCCAGGAGCTTCTACCA
CCGAATAGTGCTGCACGGCAAGCCAGGATCTGGGCGAAGGTCCTTGGCAT
ATGTGCTAGCCCAGCGCTGGAATCTGCTAATATTGGATGCCGATGTGCTG
GCCTATCATAGCATCAACAAACAGGACCAGGATGAGCCGTCCAGATTGCT
GCAGGAAGCCATTGAAAAGGATTGTGTCTACAAACGTTCGCAGGCAGTGG
GCAATCTCATCGAGAACAGACTCCTCCAGGAGGACGCCCTTCACAGGGGT
TGGATTCTGATCAATTACCCGAACAATAAGTGCGAGGCTGAGGAACTCTT
CGAGGGCTTCACTGTGCCACCGAATCGATTCGTATTCCTACAAATCGACG
AGCGTCTGGCTCGCATGAGAATCCTGCTCAATAGCTACTCGCCAGGACCT
CAAGCTCACGTCAGTTTTGTGGACCGCCAGATGGCCCAGTTCCGGAAAAG
TGAACCTGCTCTAAGCTCCTACCTCAGCCAGCGGAGAGAAGTGGTCTATG
TGGATGCGTCACCTTGTTTCGAGCAGGTCAAGTGCGGGATCATCTCGGAG
CTCACCAAAACTCCCTATGTGCTGGGTAAAAATACGGCGAGGCAAATGCC
AAAATCGCAAGCTTTCTAGACCAT
FMO04227.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15543-RB | 1595 | CG15543-RB | 61..934 | 34..906 | 4330 | 99.8 | Plus |
| CG15543-RA | 1036 | CG15543-RA | 61..934 | 34..906 | 4330 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30742940..30743813 | 34..906 | 4305 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:23:53 has no hits.
FMO04227.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:33:12 Download gff for
FMO04227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15543-RA | 54..941 | 23..915 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:50:26 Download gff for
FMO04227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15543-RA | 33..920 | 23..915 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:38 Download gff for
FMO04227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15543-RA | 54..941 | 23..915 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:38 Download gff for
FMO04227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30742936..30743820 | 32..915 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:33:12 Download gff for
FMO04227.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26568658..26569542 | 32..915 | 98 | | Plus |
