Clone FMO04230 Report

Search the DGRC for FMO04230

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:42
Well:30
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11885-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04230.5prime Sequence

479 bp (479 high quality bases) assembled on 2008-07-30

> FMO04230.5prime
CTTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGAATCACACA
GCAAACAAACCTCGACAAATCGGATTCGACAGGCAGTTCTCAGCGGACGT
GAACGGCGTTCCCACGGAGATAGTGTTCCACTGCTTTGCCAAGAAGTGGT
TCTTAGTCATAACGCAGCTCGGCAAGATTCCCGGCATCTACAACGTGCAC
TTCGATGTCAAAAAGGACGAAAGAGTGGTTCCCTATTTGCACGGACCCGT
GGACAATCCGGAGTTCCACGTATCGGTGCCAATCACGATGAACTGCTGCT
TGGGCTTGGACACCGACGAGACTCGCAGCGCCATACAGTTTCTGGTCAAC
AGAACCGGACTCCACAAGTGCCCGACGGAGTTCGTGGTGGGCCTGGGTCT
CAAGAAAATCGACGGACCCAATCTTCGTGCCCTAGCTAAGGTCCTCGAGG
AGACGTTATTCGCAAGCTAACAGTTGCAT

FMO04230.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG11885-RA 556 CG11885-RA 85..507 39..461 2085 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 420944..421366 461..39 2085 99.5 Minus
Blast to na_te.dros performed on 2014-11-28 21:31:01 has no hits.

FMO04230.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:31 Download gff for FMO04230.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11885-RA 85..507 39..461 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:42:43 Download gff for FMO04230.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11885-RA 42..464 39..461 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:02 Download gff for FMO04230.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11885-RA 85..507 39..461 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:02 Download gff for FMO04230.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 420944..421366 39..461 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:31 Download gff for FMO04230.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 420944..421366 39..461 99   Minus