FMO04231.5prime Sequence
1108 bp (1011 high quality bases) assembled on 2008-07-30
> FMO04231.5prime
CTTCGTATAGCATAATAAAACGAAGTTATCAGTCGACATGGCCAACAAAT
TCAGGAGTCTGAACAGCAAACTTTTCCAGCTGGCCATGAGCGGCATCCAG
CGGACATCGGTGCGTCCGCGGATAAGTTTTCCGGGTCGTGGAAGCGGCTT
TACTGGAAATCGCAAGCTGCTGGGAGCCCTGGGAGCCCTAACCGGAACAG
CAGGGCTGCTGATCTACGCCCTGGAAACCAGCGTGGATGCCTCCTCGGAC
TGCGTGCATCCGGCCCACCAGCACTGGAATCACAAAGGGCTTTTGTCCGC
ATTGGACAAGGAGAGCGTGCGTCGAGGTTACACCGTTTACAAGGAGGTCT
GCTCCTCCTGCCACTCATTGCAGTACATGGCCTATCGCAACCTGGTGGGA
GTGTGCATGACGGAGGCGGAGGCCAAGGCCGAGGCGGAGGCCATCACGGT
GCGGGATGGGCCCAACGAGGAGGGCGAGTACTACGAGCGTCCCGGCAAGC
TGTCCGATCACTTCCCCTCTCCGTACGCCAACGAGGAGGCGGCCCGTTCC
GCCAACAATGGCTCCTATCCGCCGGATCTCAGCTATATTGTGTCGGCTCG
CAAGGGCGGCGAGGATTACGTGTTCTCCCTGCTCACCGGATACTGTGATC
CTCCGGCTGGGTTTGCCCTTCGTGATGGACTGTACTTCAATCCGTACTTC
TCGGGCGGAGCGATTGCCATGGGCAAGGTAGTTGACAATGAGGTGGTCTC
CTTTGAAGATCCAAATGTGCCTGCTTCGGCCGCCCAAATTGCCAAGGATG
TGTGCGTCTTCCTCAAGTGGACTTCAGAACCGGAGACCGACGAACGTCGC
CTGCTGCTCATCAAAGTTACTCTGATTTCGACCTTTTTGATTGCCATTTC
CTACTACATCAAGCGTTTTAAGTGGTCAACGCTCAAGTCTCGCAAGATCT
TCTTCATTCTCGAACTGAAGTCAAGCAAAAAGAGAGGCGAAGAGCCGCTA
AAGCAGCGCGCAGGCCAAGGAGCATGGAGTGCAACAAGTGCGAAAACAGA
ACGAGAAAAAAGACGCAAGCTTCTAAACATTCGTTTGCGCGCGGGCCAGT
AGTGACTA
FMO04231.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14508-RA | 1293 | CG14508-RA | 218..1249 | 38..1064 | 4805 | 98.1 | Plus |
| CG4769-RB | 1145 | CG4769-RB | 357..805 | 274..722 | 655 | 76.4 | Plus |
| CG4769-RA | 1521 | CG4769-RA | 357..805 | 274..722 | 655 | 76.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29202704..29203735 | 1064..38 | 4675 | 98 | Minus |
| 3L | 28110227 | 3L | 5361734..5361968 | 488..722 | 500 | 80.9 | Plus |
Blast to na_te.dros performed 2014-11-28 19:13:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 1550..1614 | 1003..1069 | 113 | 69.1 | Plus |
FMO04231.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:05 Download gff for
FMO04231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14508-RA | 218..1249 | 38..1064 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:14 Download gff for
FMO04231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14508-RA | 218..1249 | 38..1064 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:39 Download gff for
FMO04231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14508-RA | 218..1249 | 38..1064 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:39 Download gff for
FMO04231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29202704..29203740 | 30..1064 | 97 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:05 Download gff for
FMO04231.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25028426..25029462 | 30..1064 | 97 | -> | Minus |
