FMO04232.5prime Sequence
463 bp (463 high quality bases) assembled on 2008-07-30
> FMO04232.5prime
TAGCATACATTAAACAAAGTTATCAGTCGACATGAGTTGGTCGGGTTCCA
GTGACGAGCTCGGGGTTATTGAGCAGCTGAAAAAGTCCGTGGAGTCGATC
GTGGCCAAAACTGGGCCCAGCAGCAAGTTCTCCAAGGATCTCGTCCAGCG
GATCGGCGAGATGCAGAGCAAGCTGGAGTCCCTGGCCGAAACGGATCGGC
ATGTGTTTCTCGCCGAGATGAAGGACAAGTTCCAGCAGACGATTGGCAGA
ATCGAGGAGCGAATAGTGCAGCACGCCCATTTCGCACAGACCTACTCCAG
TTCCATAGTGTCGGCAGTGATCTTTCTCTTGGTCTCCATATTCGCTCTCT
TTGGCTACAAGCTGTACAAATCCCTGACGGAAAAGGAGCTCAAGAAGCAG
GAGAAACTGAAGAGCAAGCAACAGAAGAAGGCCAAGAAGTCAAACGCAAG
CTTTCTAGACCAT
FMO04232.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42336-RC | 747 | CG42336-RC | 183..598 | 30..445 | 2080 | 100 | Plus |
CG42336-RD | 707 | CG42336-RD | 71..390 | 30..349 | 1585 | 99.7 | Plus |
CG42336-RD | 707 | CG42336-RD | 457..558 | 344..445 | 510 | 100 | Plus |
CG42336-RF | 901 | CG42336-RF | 651..752 | 344..445 | 510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11294853..11295172 | 349..30 | 1585 | 99.7 | Minus |
2R | 25286936 | 2R | 11294685..11294786 | 445..344 | 510 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:49:47 has no hits.
FMO04232.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:42 Download gff for
FMO04232.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42336-RC | 179..603 | 24..450 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:45:19 Download gff for
FMO04232.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42336-RC | 179..603 | 24..450 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:25 Download gff for
FMO04232.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42336-RC | 179..603 | 24..450 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:25 Download gff for
FMO04232.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11294680..11294785 | 345..450 | 98 | <- | Minus |
2R | 11294858..11295176 | 24..344 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:42 Download gff for
FMO04232.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7182185..7182290 | 345..450 | 98 | <- | Minus |
arm_2R | 7182363..7182681 | 24..344 | 98 | | Minus |