FMO04233.5prime Sequence
772 bp (772 high quality bases) assembled on 2008-07-30
> FMO04233.5prime
TTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGGGGTGTTGC
AGACAGTCCAACGAACGCTGTTGATGCAGCACAGCTTGGGATCGCTGACG
ATCAAGCGCACATACGACACGGTAAAAAAGATGAATCTGCGTCGCAGGCG
TTTGGAGCATCTAAAAGAACTCAAGCGGCTAGACGAAATGTGCTACAAGG
CGGCCAGTCGCAACGATAAGAAGTGCCATCCGCCAGTGCTACCACTACCC
AAGATGGAGTGCATAGACGACCCATGTGCGGAATCAGAGATGCCATTGGA
TCTGGACCACTATACTCCGAGCGACAAGGCCGCGCGCAAATATCAACGCA
CCTGGTGCGAGTGCTATATGATACCCAAGGCGGCTGTCAAGGCCAGGAAA
TGCTATCCGAATAGACCGCGGCGTAAGTTCGAGTGTCCGAGGGTCTCTGA
TGTCGAGTGCCGCTGGGATCCCATGCCCTGTGATGACGTGAAGAAAAAGC
CCGAGATACTGATTGAAGTGCCGCGTATCGGGAAGTGGCCATGCTGCAAG
ATCCCCACGCCAGGTTGCCGCGATGGCCGGATACCACCATCCTGCGACGC
TGGTCGAATTCCCACCTGCTGCAAGAAGCGTCGCACCAAGTATCCCAGCT
TCTCGGAGTGCAAAAAGGAACTGCTCGACCCCATCCCACCATGCGAGTGC
GAGAAGAAGGTTAACATGTGCGACGTGTATGCATATTTCCGCCATAAGAC
ACACGCAAGCTTTCTAGACCAT
FMO04233.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12861-RA | 1111 | CG12861-RA | 109..825 | 38..754 | 3420 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14664532..14665248 | 754..38 | 3420 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:45:42 has no hits.
FMO04233.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:20 Download gff for
FMO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12861-RA | 100..831 | 29..762 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:16 Download gff for
FMO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12861-RA | 95..826 | 29..762 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:11 Download gff for
FMO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12861-RA | 100..831 | 29..762 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:11 Download gff for
FMO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14664526..14665257 | 29..762 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:20 Download gff for
FMO04233.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10552031..10552762 | 29..762 | 97 | | Minus |
