Clone FMO04234 Report

Search the DGRC for FMO04234

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:42
Well:34
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG6914-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04234.5prime Sequence

489 bp (489 high quality bases) assembled on 2008-07-30

> FMO04234.5prime
TCGTATAGCATACATAAAACAAAGTTATCAGTCGACATGCCTCCGAAACC
CAAGCATCGCGACGTAGCCGGCTTTCTCAGCCGGGTGCGCAACTTCCTGC
TGGGCCGCACCCACAAGACGGCCCATCGCTTCGCGGACATGGTCTCTCCG
CGCACTCAGCCGCCCCCAAACATCCCTAGTGGTCCTACCCAGAGTCTGTT
CGCCAACTACTACTACACCAGGGATCCTCGGCGCTTGGTGAAGCCCTTCG
TCGACGTGGTGCAGGAGCACAAGAAGATGCTCACCGCCAAGGTGAAGGAG
GAGGAAGCAGCCAAAAAGGCTCAGGCCAAGTCTGGAGATGCGCCGAAAGA
TGGTAGCCCCATTCCACCTGTCGGGCCCAAGACTACTGATACAAATGAAT
GCGATGAAGGCAATTCCGGCGCGAAGAAGCTCCCGACTCCAGGAAAGGTG
CATTCTTGGGAGGGGCCACATGCAAGCTTTCTAGACCAT

FMO04234.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG6914-RA 758 CG6914-RA 71..505 37..471 2175 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22606439..22606873 37..471 2175 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:43:03 has no hits.

FMO04234.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:48 Download gff for FMO04234.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6914-RA 63..515 30..481 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:45:13 Download gff for FMO04234.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6914-RA 63..515 30..481 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:52 Download gff for FMO04234.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6914-RA 63..515 30..481 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:52 Download gff for FMO04234.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22606428..22606883 28..481 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:48 Download gff for FMO04234.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22599528..22599983 28..481 98   Plus