FMO04237.5prime Sequence
1259 bp (996 high quality bases) assembled on 2008-07-30
> FMO04237.5prime
ACAAAAAAGAGAAGTTATCAGTCGACATGCCGATCAACCAGAAAGAAGTA
ACGCCGCAACTAGACAGTCAGACAGGTGAGGATCAGGGGGAGGAGGAGGA
GCAGCCGGAAGACGAGAATCGTCTGGAGAAGTTTACGGTGCGTCTTAATG
GACAACATGACCTGGAGCAGCGTTTAAAGGATTTCAAAGCGGCATGCGAG
GCTCACGAGAAGCACGCCAGACGGCGAAAACGGAAGAGATACTATCATTT
GGGTCTTGTGGCCAAGCTGGTGACGGAAACCACTCACGACGAGCTGCGAC
GTATGCTGGAAAATGGAACCTACACCTTTCACGTGGATACGGTGGGCAAC
AAGCCCGATGAACTGAAAGCCATTTTGGACACCATGAACATTGCGATATC
GGCGCATTCTGCAGAGAGGGAACTACGTCTGACAACTGGCTTGGCTCTGG
AGATTAACGGCGAGTGCTGTCGCGTTGGGAGACTGAGGAACAACTGCACC
GTGATGCTGGCACGAGGTGGGGTGGTCACACTCACCACGGATGAGTCCTA
CCGCTACAAAGGCTTTAAAGAAATAGTGTACGTAATCAATCTGCGGTGTT
ATCTCGCCTCCGTTCAGTTGGGCGATATTGTGATGATCGGACGTGAAGTT
AGAGGTAAGGTGGTGAAGACCCTGCGGGAAGCACTAACCGTGATGATCAT
AGATGCCGGTCTGGTAGCCTCCTACGACTTTATAGAGCTTCCTAGACAGT
GCCACGCTCTCGATCCGGACCTATATCCCGATCTGTACATGAAGGACCTT
GAGATGGCCGCGTCTTTGAAATGCCAACTATGTGGGTTCTGCCCAAGATA
CGATGCAAGAGCTTTTCTTCGTGCCGTGCGGCAGACCTTGAACTCGGACT
TCAACCTTAAGTTGATCGGAATGATAGATTTCGAGTTATGTGCGAAGCAA
CATGCTTGATTTGCTAAGGCATCATAAAGCTTGGTGACTACATTTGGAAT
ACCCGGACATTGTTTCAACGTTAACTGTTGCGTTATATAACCTACATTTA
TGAAGGACGTGGCTTTCCGAATTTCCGCAATGCCAGAAGAGGCAGATATT
GGCACTGTTCCGCTGTGACGTTGCATGGATTCAGCGATTGAGGTTGCCGA
TTTCTTTGAAGTCAAGCCTTATTCCATTCCAAGTCATGGTGCACACAATA
TTCGCCTGTAATGTCAAAGAGCGTGTATGCTCTAATAAGAATATAATCTC
CGTGTAGTT
FMO04237.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12229-RA | 1960 | CG12229-RA | 185..1300 | 27..1154 | 4885 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17435281..17436247 | 998..27 | 4550 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:12 has no hits.
FMO04237.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:19 Download gff for
FMO04237.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12229-RA | 181..1274 | 19..1131 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:45:22 Download gff for
FMO04237.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12229-RA | 181..1274 | 19..1131 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:29 Download gff for
FMO04237.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12229-RA | 181..1274 | 19..1131 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:29 Download gff for
FMO04237.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17435158..17436251 | 19..1131 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:19 Download gff for
FMO04237.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17428258..17429351 | 19..1131 | 96 | | Minus |
