FMO04249.5prime Sequence
1194 bp (294 high quality bases) assembled on 2008-07-30
> FMO04249.5prime
TTCGTATAGCATACATTATACAAAGTTATCAATCCACATGGAAACAACCG
CTCAGCTGCAGCAATTGAAACCCCAACAGAGCGTCATGTCGCACGTCACG
GTCACCGAGAGTGATGCCGAGTTTGCGATCTTGAATCTGGATTGCAACGA
AGGTTTGGAGAGCTCGGTGACCAAGATTCTGGTGGCCATCCAAGAGATGT
TCTGCATTTACTTTGAGGATCTCAAGAAGGAGCTGGAACTGCAGAAGATG
GCGGCCCTGACCTTGAATCACCTGACCCAACGTTACAGGATCAACGCGAA
GGAGGACACGAGCTGCACGTGTCCGCATATCTATGAGATCGAATCGGATG
ATGCGATCATTAACAAATACTACATCTACTACCAGGTGATAGCCTGTTCC
AACAATAACCAGGGTTGGGTCATCCACAACATGCGCCCCTATGTTCTCCT
CTTTCGTCGAGAGTGCGCCAAGTTGAATCTGAACGAGGATAGTCCCTTCA
TCATGGGTGACGCTTTCCACAAGCCAATCAAGTTCTTCATCGACTTGGTG
GAGGAGCTCTTCACCTACTTCTACAGTGGACACGTACAGTTCGACTGCAC
TGCCCACATGTTGGATCCCTTGGACTTGAACAGCATCCAGTACTATCAGA
AGCTATTGGAACCCAATGAGGATTTCGCAAATTACTTCAAGTACAACATG
ATCTTCTGCAAGTGCCTGCGTATGCCGCGCCGTTGTCCTGCCCACGAGTA
TCCGCAAGTGAAGAGGACTTTAACGCCACCTTTGTCAATCATGCCAAGAA
GAAGCGGTGTGCCAGGCGATGCGAAAAGATGGCCGAGGCCGAGAGCAATT
TACTGTATCGAAATAAGTCCATAGTTAGACTCCAACGTCCCAGTGAGATG
TCTGGCATAATGCACCGGTCAGTATTAGACCAAGACGACGATAGGGATCT
GAAGAGATCTCTAAACACCATCGTCGCAGTGAAAGGTCTATAATCAGTAT
ACTAAGACGATTACATACTCTCTGCCGACAATCGACCGAGCCTAACTGAA
AGGATCAGTATCGAATGGTGTGACCACTGAATCCTCGCATGCTTCATGAA
CAGTCAGTGGCCGCGGTCCAGTAACGTCTATCGTATCGATAGCAATCGAA
TCACCTAGCCTAGTATCTGACTAGACTAGGCTTGGACTCCGACA
FMO04249.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30393-RA | 1216 | CG30393-RA | 64..1096 | 37..1060 | 4460 | 96.2 | Plus |
| CG30391-RA | 1538 | CG30391-RA | 286..780 | 226..720 | 885 | 78.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21266551..21267516 | 1000..37 | 4275 | 97.1 | Minus |
| 2R | 25286936 | 2R | 21265563..21266057 | 720..226 | 885 | 78.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:39:06 has no hits.
FMO04249.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:39 Download gff for
FMO04249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30393-RA | 61..1096 | 31..1060 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:45:23 Download gff for
FMO04249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30393-RA | 61..1096 | 31..1060 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:44 Download gff for
FMO04249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30393-RA | 61..1096 | 31..1060 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:44 Download gff for
FMO04249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21266484..21267519 | 31..1060 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:39 Download gff for
FMO04249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17153989..17155024 | 31..1060 | 95 | | Minus |
