FMO04251.5prime Sequence
592 bp (592 high quality bases) assembled on 2008-07-30
> FMO04251.5prime
TTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGCGGAGTACG
GTCGGGAGCCTTGTCCCTTTCGCATTGTCGAGGATTGTGGTGGAGCCTTC
GCAATGGGCGCCTTGGGCGGAGGAGCCTTCCAGGCGATCAAGGGCTTTCG
AAACGCCCCCTCCGGCCTGGGATACCGATTGAGCGGAGGATTGGCGGCGG
TACGGGCTCGATCCGGCCTGGTGGGTGGTAACTTTGCGGTGTGGGGCGCT
ACCTTCAGCGCCATCGACTGCTCACTGGTTTACTTCCGGAAGAAGGAGGA
CCCGTGGAACGCCATAATTAGTGGAGCAACCACCGGGGGCATTCTTGCTG
CTAGAACTGGACTAACCTCCATGCTCAGTAGTGCCTTGGTGGGCGGGGCT
CTATTGGCCCTAATAGAGGGCGTGGGCATTGTGGTGTCCCATTATTCGGC
GGATTCCTACCGCCAGGTGTCGCCCGTGGAGCGGCAGCAACGGTATAAGC
AGGAGCTTTTACGGCAGCAAAAGGGCGTTTCTCCACTCGCAGCGACTTAT
GGAGAGATTGACTCTTCGGCATTGGCAAGCTTTCTAGACCAT
FMO04251.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tim17b1-RA | 785 | CG1158-RA | 45..584 | 35..574 | 2700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5300189..5300514 | 35..360 | 1630 | 100 | Plus |
| 3R | 32079331 | 3R | 5300704..5300901 | 359..556 | 990 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:12:18 has no hits.
FMO04251.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:59:01 Download gff for
FMO04251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim17b1-RA | 38..584 | 28..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:42:54 Download gff for
FMO04251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim17b1-RA | 38..584 | 28..574 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:11 Download gff for
FMO04251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tim17b1-RA | 38..584 | 28..574 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:11 Download gff for
FMO04251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5300182..5300513 | 28..359 | 99 | -> | Plus |
| 3R | 5300705..5300901 | 360..556 | 100 | -> | Plus |
| 3R | 5300968..5300984 | 557..573 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:59:01 Download gff for
FMO04251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1125904..1126235 | 28..359 | 99 | -> | Plus |
| arm_3R | 1126427..1126623 | 360..556 | 100 | -> | Plus |
| arm_3R | 1126690..1126706 | 557..573 | 100 | -> | Plus |
