FMO04253.5prime Sequence
621 bp (621 high quality bases) assembled on 2008-07-30
> FMO04253.5prime
TATAGCATACATAAAACGAAGTTATCAGTCGACATGCATGTGGTGGGGGC
ACTGGTCAATCTGCTGCTGATCTTGGCCTGCATTTACACGATGACCTCAC
TGACCCCGGCGGACCATCCGTATGCCTTCCTGGCGGCATCCTTCAGCCTG
GTCCACGGAGTGCTGGGCGTGGTTCGCTCCTTTGCCAACGAGCCCGACGA
GTGCGGACGCACCTTTATGATCTCAGCCATCATACTGGAGGTTATCCCGC
TGCCACTGGCGAACATCGAGTTCTACCTGGTATCCGATCAGTCGGGAGTG
GCGCTGGTGCACGGCCTGTCGTTGATTCCACTGTTCTACGACATGATCGG
CAAGATCAGCGAGGACTGGGACAGCTCCACGGAGACGCTGATGGACCTCG
CTCTGTTGGGCAACATCGGCTCCACGTTGTATCTGGCCATCAAGGACGGC
AACCATATCTACTTCGGTTGGGCTGCCACCGCGCTCCTCGCCAGATACGG
CGGTGCAATTGTCGATAGCTGCAACGAGGGCCTTAGCAACGTTGTAGAGA
CTCTGGGAAACACCGGCATCCTGGCCCTTATGACCTACGCACTCACTGAG
GGCGCAAGCTTTCTAGACCAT
FMO04253.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12679-RA | 759 | CG12679-RA | 131..700 | 34..603 | 2820 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20375823..20376392 | 603..34 | 2820 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:39:09 has no hits.
FMO04253.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:40 Download gff for
FMO04253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..705 | 34..611 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:45:24 Download gff for
FMO04253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..705 | 34..611 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:45 Download gff for
FMO04253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12679-RA | 131..705 | 34..611 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:45 Download gff for
FMO04253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20375818..20376392 | 34..611 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:40 Download gff for
FMO04253.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20246845..20247419 | 34..611 | 98 | | Minus |
