Clone FMO04255 Report

Search the DGRC for FMO04255

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:42
Well:55
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9570-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04255.5prime Sequence

683 bp (683 high quality bases) assembled on 2008-07-30

> FMO04255.5prime
CGTATAGCATACATAAAACGAAGTTATCAGTCGACATGACCTGCACATTG
GTACTCCTGATTGCCAGCGTTCTGCACTTCCGAATGCGTGGCAGTTGTCT
GCTGGACATAGAGCGTTTCCCGGTAATTCCCGGCACCATCTACGCCGGCC
ACATTGCCTACTGCGCCATCCTATACTTCCTGCACGACCTGGAGATCCTG
CCCACGCGCTATCGTAGCCGGATGGGCTGGCTGACCACCTTCCTGATCGA
ACTGGTGTTGGGCGTGGCCTTCATGGAGGTCCTGGCCCTGTGGCTCTGGT
GCAGCGTGGAGCACATCCTCCACCTGTCCACCCAGTTCGTGCTGCGCCGC
TATCTGGGCGTCTCCACCGAAGTCTACCAGCGCTGGGAGTGGGCCATCAT
GGGTGGTCTGATGACCACGCTGGCAGCCATGCTCTGGATAAACGCCTTCG
AGGCCACGGAGACAACTAAAGCAGAGAGGGTGTCGAAGGATGTCAAGGAC
ATCCGGATGAAGGCGGTCCTGTGCCAGCGGGAGGAGAAACAGAAGCAGGA
TCACGATCTGGAGAAGATTGAGCAGCCTGCTCCAGAGCCAGAGGAGTCAC
AAAATCCTGATGAAGTGCAGCTGCCGGAGAATCATCTAAAGCTGCTGGCC
ACCACCACTGATTGCGCAAGCTTTCTAGACCAT

FMO04255.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9570-RA 1226 CG9570-RA 163..792 36..665 3150 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20051456..20052085 36..665 3150 100 Plus
Blast to na_te.dros performed on 2014-11-28 21:09:48 has no hits.

FMO04255.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:13 Download gff for FMO04255.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9570-RA 154..795 26..669 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:42:55 Download gff for FMO04255.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9570-RA 154..795 26..669 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:41 Download gff for FMO04255.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9570-RA 154..795 26..669 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:41 Download gff for FMO04255.5prime
Subject Subject Range Query Range Percent Splice Strand
X 20051445..20052088 24..669 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:13 Download gff for FMO04255.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19945478..19946121 24..669 98   Plus