FMO04258.5prime Sequence
415 bp (415 high quality bases) assembled on 2008-07-30
> FMO04258.5prime
TTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGATGACACAT
TATCAACGGTAGAAGGCGGGATGACGGAAACATCCTCATGGAGCACCACG
ATCGCCACCACCACCACTACAGAGGCCGCCAAGGCGGGTAGCATGGCTGT
CGGTATTATTGTCCTGATCGTTGTTATGGTGCTCCTCTGCTGCCTGCTCA
TCATCTGCCTGCCGCTCCTCTGCCTGTGCGGCTGTTGCGGACTCGCCTGC
TCCGCGTGCCTCGCTTGCGACGAAGGATGTTGTGGTGAAGGCGGCGGCGG
TGGATGTTGCGGCGATGACGGCGGTGGATGTTGCGGCGATGGCGGCGGGT
GTGGCGATTGTGGCGACGGCTGTGGGGACTGCACCTTGGACGATGATGCA
AGCTTTCTAGACCAT
FMO04258.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13494-RA | 604 | CG13494-RA | 73..433 | 37..397 | 1805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21954413..21954773 | 397..37 | 1805 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:14:39 has no hits.
FMO04258.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:00:41 Download gff for
FMO04258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13494-RA | 73..438 | 37..405 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:28:53 Download gff for
FMO04258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13494-RA | 73..438 | 37..405 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:30 Download gff for
FMO04258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13494-RA | 73..438 | 37..405 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:30 Download gff for
FMO04258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21954408..21954784 | 23..405 | 97 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:00:41 Download gff for
FMO04258.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17841913..17842289 | 23..405 | 97 | -> | Minus |
