FMO04265.5prime Sequence
881 bp (881 high quality bases) assembled on 2008-07-30
> FMO04265.5prime
CTTCTCAGTGCAACTAAAGGGGGGATCTCGAGGGATCCATAACTTCGTAT
AGCATACATAAAACAAAGTTATCAGTCGACATGAACACTTGTCGCTCATT
GGCTCGAGGATTGAATATTTGCAGTCCGCAATTAAGGCACTTGCTCGCCC
AAAAACCATTCAACTCGGCTCGTCTTCTGGCTACTAAAGCCCCAAAGGAT
CATAAGGCTAGTGGACCCACGACAATTGGACCTAGTGGCGATATCCTCGT
TCCGCCTGTCACTTTGAAAGTGATACCCTTTCGTATGCCTCCCGATTTGC
CTTATGACGATCGAAATATGCTGCTTGGAAGACAGTTATCGCCACATTTG
TCCATCTACAAAATTCAATTGACTTCCACCTTGTCCGCATTTCTACGAAT
TAGTGGGTTTGTTCTGGCCGTTTTTGTTTGGTTCGTGGGAATCAGCGGCC
TTTGCTTGCAAGGCGATATGGAGGGATTTATAAAGAAAGTCGAAAAATGT
GACTGCCACGGCATGGTGACGATGGCCAAGGTGATGGTGACCATGCCATT
TGCCTACCATACAGTCGCCGGAACTCGACATTTGATCTGGTATTTGAACA
AGTTTCTCACGATACCAGAGATCTATGCCACCGGCTATGTGGCTGTGGCT
CTAACCATTGCTCTGTCTGCCTTTTTGCTGGCCGTTAAAGTGGGCGAGAA
GGTTAAGGAGGAGGTGGTAGATCTCACAAAAACCAAAAAGGGTCAAAAGG
CTAAAAAAGAGGCTCCGAAGGATGCGAAGAAAGATGCTCCCAAGGATACC
AAAAAGGAACCCAAGAAGGATGCAAAGGACAAGAAGAAAGACGAGGAAAG
CAAGTCTGCCAAAGCAAGCTTTCTAGACCAT
FMO04265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6629-RA | 983 | CG6629-RA | 110..892 | 81..863 | 3900 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11114762..11115534 | 863..91 | 3850 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:02 has no hits.
FMO04265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:00 Download gff for
FMO04265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6629-RA | 110..892 | 81..863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:42:59 Download gff for
FMO04265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6629-RA | 110..892 | 81..863 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:47 Download gff for
FMO04265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6629-RA | 110..892 | 81..863 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:47 Download gff for
FMO04265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11114762..11115534 | 91..863 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:00 Download gff for
FMO04265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6940484..6941256 | 91..863 | 99 | | Minus |
