FMO04266.5prime Sequence
1223 bp (1055 high quality bases) assembled on 2008-07-30
> FMO04266.5prime
TCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGTCCTTTCACCG
GATCAATGTCAAACAAGCTTCCATAGCCGCCCGCCAGCGGCAGTCGCGGA
CGACCAGGATGACCCGGCACACCATTTTCAATTTGAAGAGACCCATTACC
TTCCAGGTGCGCAAATCGCTGGTGGAGTACGTGGACATGGAGCTAGCGGA
CATGGACACCTCCGTGTTCTATCAGCGCATCTTTATCCTGGCCAAGAACT
GCCACTTGACGCCAGTTGTGTCCAACGAGGAGTTGCTCGCCGACGCGGTG
GTGGAACAGGCTGAGCCTGAACCAGATGAAGCGGCGCCCATACAGTTCAT
GGAGGATGTGATCTTCGACAACACTGAAACGGAATCGCCCATGAACACGA
CGGCGGATCCAGCGCCCATTCCTGCGCCGGAAGAAGGTGCGACGGAAACT
GCAGAAGTAGTTACCCACATGTTCCGTTTCAGTGAAGACGATCCAGAAGA
AGACTTTGTCGAAGAGGAGGAACTGGAAATGGACACCCAAGCACCCGATC
AGCCCAAGGACTTCTTTGCCATCTTCAGCGAGCGCCTGCAGGAGCTGCAT
AAGCAGTGCAAGGCGCTGGCCATCACGCCGGATCCCATGTGCGGATTGTT
TCTCCACATGGGCGAATACAGCATGCTGATGCTGGAGTCCTCCGAGGACA
TGATCGGATGCTTCACACGGGCCCTGGCCGATTGCTGTGAGACTTTCTGG
TTGATGAATCGCGTCTTCCAGATCGAGGATCACGTGCAGGAGCTCTATAC
AAAAGAACTTATGTTTCGCCGCATCCCTTCCGTCTTTCTGAACGAGAAGT
TCCCCACCTCCACGCCCACCGATGAGTATCTCATGGGAAACAGCATCTGA
TCATCAAGGATAAGCTGCTGACCATCTGCCGGCTGCTCTCGGAGGGTCAG
CAAGTGATCCGGACGGATCTCCACGCGAGAAAGCGACATGGAGGACGATT
ATGCCAAAGTCAAGTCCAAAGCTCATCCTAGCGACACTTGCCGGTGGAAG
GTGTTCGGAGCACTGCCCGGATCAGCGCATCGGACTGATTTGCATCACAC
GATCTACTACAGGTGGGAGAGTCGCCTTGATCTACGGGCGGGGTGCCTTC
GCCGACAGATGCCTCTTCGGGCCCATACCCGAAGAACAACTTACCCTCTC
TCTCCGAAAAGACTATCTTTCCC
FMO04266.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15878-RA | 1631 | CG15878-RA | 116..1238 | 37..1142 | 4975 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2211410..2212388 | 1013..37 | 4655 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:48:52 has no hits.
FMO04266.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:14 Download gff for
FMO04266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15878-RA | 116..1188 | 37..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:50:41 Download gff for
FMO04266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15878-RA | 116..1188 | 37..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:03 Download gff for
FMO04266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15878-RA | 116..1188 | 37..1096 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:03 Download gff for
FMO04266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2211316..2212388 | 37..1096 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:14 Download gff for
FMO04266.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2211316..2212388 | 37..1096 | 97 | | Minus |
