FMO04268.5prime Sequence
424 bp (424 high quality bases) assembled on 2008-07-30
> FMO04268.5prime
CGTATAGCATAATAAAACGAAGTTATCAGTCGACATGCCTACACTTCCGC
TGTGCCTGCTGCTCCTGGTGTTGGCGATTGCCTTTGGCCACGCCTACGAG
GCACCTGAGGCACAGGTGCGCGTGTTCTATCCCCGGGGATTCGAGGTCTC
CATTCCGGATGCGGAGGGTATTTCACTGTTTGCCTTCCATGGCAAGCTAA
ACGAGGAGTTCGACGGCCTGGAGGCGGGACAATGGTCCAGGGATATTCCG
AAAGCCAAGCGGGGACGTTGGACATTCCGAGATCACAAGACAAAGCTCAA
CCATGGAGATACCCTGTACTTTTGGACCTACGTCATTTACAACGGGCTGG
GCTATAGACAGGATGAAGGTGCTCATGTGGTCACCAGTTACGACAATCCA
CATAAAGCAAGCTTTCTAGACCAT
FMO04268.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:02:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30148-RB | 1064 | CG30148-RB | 56..427 | 35..406 | 1845 | 99.7 | Plus |
CG30148-RA | 618 | CG30148-RA | 56..427 | 35..406 | 1845 | 99.7 | Plus |
GNBP3-RA | 1531 | CG5008-RA | 111..341 | 125..355 | 315 | 76.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:02:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20547232..20547603 | 406..35 | 1845 | 99.7 | Minus |
3L | 28110227 | 3L | 8955131..8955361 | 125..355 | 315 | 75.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:02:25 has no hits.
FMO04268.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:49 Download gff for
FMO04268.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 44..427 | 23..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:25 Download gff for
FMO04268.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 67..450 | 23..406 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:00 Download gff for
FMO04268.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30148-RA | 44..427 | 23..406 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:00 Download gff for
FMO04268.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20547232..20547599 | 39..406 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:49 Download gff for
FMO04268.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16434737..16435104 | 39..406 | 99 | -> | Minus |