Clone FMO04272 Report

Search the DGRC for FMO04272

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:42
Well:72
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13110-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04272.5prime Sequence

451 bp (451 high quality bases) assembled on 2008-07-30

> FMO04272.5prime
GTATAGCATACATAAAACGAAGTTATCAGTCGACATGCTCATTCCAGAGG
TGGACATGTGGAATGTGTCCAAGAGTAGCCGGATACACCGCCTTTCCATC
TTCAATTGCGATAAGCCTGGACTGAAAGTGTTGGACTACGCCGCAGTCCG
GGGAGTTGATAGGTTCTACTTGGAGTGCCAGGACTACAGGGATTATTTCA
AAGACCCCTATAATCGAGTCCACAAGCCGATAAGGTTCACCTCGTATGCG
GGCAAGTGCGACGTTAAGTTGGATACCGACGTTGAGGTCCTTTCTGAGCC
GACCTTGTGGCGTATTGATCGCCAGCCCATCGTCTATCCGATCGACTATC
ACTCGGATATGGCACTGGGTAGACGGGACTGCGATCACATTAAAGCCTTT
TGTTCGCCAGCTGAGAGCCTAAGCTTCAAGCGAGCAAGCTTTCTAGACCA
T

FMO04272.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG13110-RA 527 CG13110-RA 79..477 35..433 1935 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9350548..9350946 35..433 1935 99 Plus
Blast to na_te.dros performed on 2014-11-28 19:43:10 has no hits.

FMO04272.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:52 Download gff for FMO04272.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13110-RA 79..483 35..441 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:45:27 Download gff for FMO04272.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13110-RA 72..476 35..441 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:55 Download gff for FMO04272.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13110-RA 79..483 35..441 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:55 Download gff for FMO04272.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9350538..9350952 25..441 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:52 Download gff for FMO04272.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9350538..9350952 25..441 96   Plus