FMO04281.5prime Sequence
983 bp (983 high quality bases) assembled on 2008-07-30
> FMO04281.5prime
AACTTCGTATAGCATAATAAAACAAAGTTATCAGTCGACATGAACGTACC
ACTCGTAGCCCTCACCAAGGATCCCAAGATGAAGAAGTCACAGAAGAAGT
CATCAATGGTGGCCGTTCCCAAGATGTCGCAGAAACCACAGAAGGCAGCA
CGTCTATTTCAGCCAAAGGTGGAGAACAAGATTACTTTGACCACTCCATT
GACTGCACCCAAAAAGGAACGGGTGAAGGACATCAAGGTGGCAGATCCTC
TTGAGAAGGAAGTAGAGTCAGTATTCGTTACAGTACCGAAAAACAAACTT
TGCAAAACCAGACGCAATCGTCCTGGTGACCGACTCTTTGATCGCCGTTC
CGGATCGAAACGCACTGGCGTAAAGGCGGTGGAAAAACGCAATGGAGCCG
GGGCCCACAACTGGGGATCCATCCAGCAGGAGATCGACTTGCGTCAGAGG
ACCAATTTGCGCACCTTCGAAGGGATGAAGTTACCAAAGGTATCGAGTTT
CGTCTACGAGTACGATTCATCGGAGGAGACCGAACAATATACACTCGACG
AGTGGCGTGCCATGCAGGCGCAGAAAAAGCAGGTTTTGAATAAGTTTATA
ATGTCTGATTTCGGTACAAAGAAAGAAGTAACAGGGGGTTCTGAAGAAAC
TGTACGAGCCGAGGGATCAGGAGACACAGACGACACCAAAGGATTGGACA
AAACAGGAGGAACTGAACAAACAGGAAATACTGAAACAGGGGAGAGGTCT
GCTGGATCTGGAGAAACAGAAACAGCCGCAGCATCTGGAGTACCTGACGC
ATCTGGAGGATCTGGAGGAACTGAGGGATCTGGAGGATTAGGAGGATCAG
GAGAGCTGGAAGACGATGGCGAAGAATTAACCGCTGACCGCCCGTTGTAC
GTTGTTGATATCCTGTTAAATTTCAACACTGATCAAGTGTTATTCCCTTA
TCGCTTAAATTCATTGCAAGCTTTCTAGACCAT
FMO04281.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PPYR1-RA | 1055 | CG15031-RA | 77..1003 | 40..965 | 4550 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15243918..15244837 | 959..40 | 4495 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:13:09 has no hits.
FMO04281.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:44 Download gff for
FMO04281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PPYR1-RA | 73..1009 | 32..974 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:08 Download gff for
FMO04281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PPYR1-RA | 73..1009 | 32..974 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:20 Download gff for
FMO04281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PPYR1-RA | 73..1009 | 32..974 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:20 Download gff for
FMO04281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15243905..15244843 | 30..974 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:44 Download gff for
FMO04281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15137938..15138876 | 30..974 | 98 | -> | Minus |
