FMO04285.5prime Sequence
929 bp (929 high quality bases) assembled on 2008-07-30
> FMO04285.5prime
TTAAAACGAAGTTATCAATCGACATGGAATGGCATCTCGTTTGCTGCGTG
CTGGCTTGCACTTTAGTTTCGACCCAAGTATATGGCCAAGAACAGGAGAA
AATTGTGCTTTCCCTGCCGGATGAAAGTGGTCAACCGGGCAAAAATCTCA
CTCTCGATGTGGCACAGCTGGCCAAGATAGTTCTTCCATCACCACATGAA
ACTCGCGTAATTGGCGGCCATGTGACCACAAATGCCAAGTTGGGAGGATA
CCTAACAGCCTTGCTTTATGAAGACGATTTTGTTTGTGGCGGTACATTGC
TCAACGAAAACATCGTCCTGACGGCGGCTCACTGTTTTCTGGGTCGAATG
AAGGCGAGCGAATGGATTGTGGCTGCCGGCATTTCGAATCTCAATCAAAA
GGGTATTCGACGCCATGTTAAGGACTTCATCCTGTCCAAGCAATTTCGAG
AGGACGACATGAATATGGATGTAGCAGTGGTACTGCTGAAAACTCCATTG
AAGGCTAAAAACATCGGAACACTGAACTTATGTTCGGTGAGCCTTAAACC
AGGCGTAGAACTGGTGGTTTCCGGATGGGGCATGACCGCTCCCCGAGGAC
GTGGGCCCCACAACTTACTACGTACGGTGACAGTGCCAATTATTCACAAA
AAGAACTGTCGCGCTGCCTATCAGCCCACGGCTAAAATAACCGACAGTAT
GATATGTGCTGCAGTGCTGGGACGTAAGGATGCGTGCACCTTTGACTCAT
GTGGGCCGTTGGTGTTCAAAAAGCAGGTGTGTGGCATAGTGTCCTTTGGC
ATTGGATGTGCTAACAACCGTTATCCTGGCGTCTACACGGATGTTATGTA
CGTGAAGCCTTTTATCGAGAAAAGCATTAAAGCTTTGCTAGCAAAACGAG
CAAGCTTTTCTAGACCATTCGTTTGGCGC
FMO04285.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11037-RA | 913 | CG11037-RA | 3..878 | 24..899 | 4305 | 99.4 | Plus |
| CG10588-RB | 3727 | CG10588-RB | 3500..3718 | 899..681 | 1065 | 99.1 | Minus |
| CG10587-RA | 866 | CG10587-RA | 560..838 | 621..899 | 465 | 78.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20960723..20961384 | 685..24 | 3250 | 99.4 | Minus |
| 3L | 28110227 | 3L | 20960433..20960651 | 899..681 | 1065 | 99.1 | Minus |
| 3L | 28110227 | 3L | 20961565..20961776 | 899..688 | 385 | 78.8 | Minus |
| 3L | 28110227 | 3L | 20955805..20955968 | 889..726 | 310 | 79.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:59:28 has no hits.
FMO04285.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:53 Download gff for
FMO04285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11037-RA | 1..881 | 23..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:29:09 Download gff for
FMO04285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11037-RA | 1..881 | 23..903 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:34 Download gff for
FMO04285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11037-RA | 1..881 | 23..903 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:34 Download gff for
FMO04285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20960429..20960650 | 682..903 | 98 | <- | Minus |
| 3L | 20960727..20961385 | 23..681 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:53 Download gff for
FMO04285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20953529..20953750 | 682..903 | 98 | <- | Minus |
| arm_3L | 20953827..20954485 | 23..681 | 99 | -> | Minus |
