FMO04287.5prime Sequence
948 bp (948 high quality bases) assembled on 2008-07-30
> FMO04287.5prime
TATACGAAGTTATCAGTCGACATGGCCAAGGATCAAGAGGGAAACACATA
TCAACCAACCGTCCCGGAGTCCACGGAGGACCAAAAACGGGAGCAGCGTG
CCCGCCTCATCAAAGCATTGAGCCGCTTCAAGCCCCGCGATGCCAGTCCG
CTTCAGTTCTACAACTGCGTTCGCGAATTGTGCATCATGCACAATTGCAG
CATCGACGAGGGTCTGGAACGAGCGGCATTAACTTGGCCAGGACTTAGCA
TGCGACAGCGTGAGCTATACGATTCGCAACGTCACGCAGAACTACCGATA
CCTGTTCCACGTCACCTGATCTACCGAGCATTCCAGAAGGAGAGCAAGGG
TCTGTGGTCCCTGGGCCGCTCCTCGGTGGGTGGCAACAAGCAGAGCACCC
GCTACACCCTGGAGTCCTACAAGCCGCCGCCCAAGTTGTCCCGTCTAAAG
ACGCAGCTGAATGAGCGTCGTCCCAAGTACGACAATCTATTGGATCTGCC
GCCCAAGGAGGCAGCTATGCGCGTGCCACCGGAGCCGAATCGTAAATTTT
CCAGGGTATCACCATCATCCGGTCGACGGATACGTAGTTTTACGCCACCG
GCCGTTACGCGTGTTCGATCCATTCAGCAGATTCTGTCAATGGCCAGTGT
GGACATGAAGAAGAGCTTACGGTTACGGAATCCGGGTAAATGCAATCGAA
CCAAGAAACCCGAAACGGTTGAAGCCGGCAAATCGCAACCGGATAAACTG
CCAACCGGAATTTCCAAGCTGACGAAAAAGAAGACGATCAAACGCAAAGG
CATCGCCTCCAAGGCAAAGCGTTTGGCCAAGGATGAGGATCTGCTGTCCT
CGAACAGCTGGGAAGAGGCCATCGGATGTGTTCGTCGGCGTCTTAATGAT
GTACAAGCCCTTAAAGTCCGAAGCTTTTCTAGACCAATTCGTTTGGCG
FMO04287.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11068-RA | 1270 | CG11068-RA | 186..1082 | 22..919 | 4450 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13955744..13956386 | 276..919 | 3155 | 99.7 | Plus |
| X | 23542271 | X | 13955421..13955675 | 22..276 | 1275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:07:51 has no hits.
FMO04287.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:16 Download gff for
FMO04287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11068-RA | 166..1070 | 13..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:48:30 Download gff for
FMO04287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11068-RA | 166..1070 | 13..922 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:17 Download gff for
FMO04287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11068-RA | 181..1085 | 13..922 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:17 Download gff for
FMO04287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13955416..13955675 | 13..276 | 98 | -> | Plus |
| X | 13955745..13956389 | 277..922 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:16 Download gff for
FMO04287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13849449..13849708 | 13..276 | 98 | -> | Plus |
| arm_X | 13849778..13850422 | 277..922 | 99 | | Plus |
