FMO04303.5prime Sequence
1267 bp (1010 high quality bases) assembled on 2008-07-30
> FMO04303.5prime
CTTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGCCAGGACC
ACTGGGGATCCTGCCAAGCGACGCAGGTGCATGTCTCGCATCAAGTTCTG
GCGAAGATCGCGCGTGGGCAGCGAAGTCGTTGAAAAAGATACAAAGCGAT
TTAAGCTTTCCTTGATAAAAGCTTGGCTTCTTCGCATCAGACAGGAGGAT
TATAAGTACAGTGGATCTTTCCAGGAAGCCATCAAGCCTGTCCTCATAAT
CGCGCAGATCTTTGCTTTGATGCCAGTTCGAAAAGTGAGCTCCAAGTTCG
CAGAAGACCTAACCTTCACCTGGTTCAGCGTTCGATCCTATTACGCCCTG
GTAACCATCCTGTTTTTTGGTGTTAGCTCTGGATATATGGTGGCCTTTGT
GACAAGTGTGTCCTTTAATTTTGATTCGGTGGAGACCCTGGTCTTCTACT
TGTCCATATTCCTTATCTCTTTGTCGTTTTTTCAACTGGCCAGAAAGTGG
CCAGAAATAGCTCAGTCATGGCAGTTGGTGGAGGCCAAGTTGCCGCCTCT
GAAGTTGCCCAAAGAGCGCAGATCCCTGGCGCAGCACATTAACATGATCA
CCATCGTGGCCACCACTTGCTCGCTGGTGGAGCACATTATGAGCATGTTG
TCCATGGGCTACTATGTCAACTCCTGTCCCCGATGGCCAGATCGTCCCAT
AGACAGTTTCCTGTACTTGAGCTTCTCCTCGGTCTTCTACTTCGTGGACT
ACACACGCTTCCTGGGCATTGTGGGGCAAGTGGTCATGTGCTGAGCACCT
TCGCCTGGAACTTTAACGACATCTTTGTGATGGCAGTTAGCGTAGCTTTG
GGCTGCTCGCTTTCGTCAGCTTAATGACTACATGATGAGGGAGGCTAGAT
TGCCCACCACTGTGGACTATTGGATGCAGTGCAGGATTACTTTCGCAACC
TTTGCAAGCTGTGCGAAGAGGTGGACGATGCCATAATCCCACATTTACAT
TGCTCTGCTTCAGAACATCTGTACTTCATCTGCGGAAACTCCTAAAGGAG
TATGCAAGGCAAAGCCGTCTATATGGCATGCCCTGTACTCTGGGTCCTCG
CTGGTCACCTACCTGGTCGCAACCCTCATCCTGTCCCTGTACAGCCTCCA
GATAAATGGATGAGTCTAAGCCAACCCCTGCATAATCTTTCAATTGATCC
TGGAAAATTGTGCAGAGAGACTTAACGCTTCGCGAGAGAGAGGCTCCAAA
GATGGACAAATTGTTGT
FMO04303.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gr64e-RA | 2882 | CG32258-RA | 1440..2596 | 37..1196 | 5155 | 97.3 | Plus |
Gr64d-RA | 2882 | CG14987-RA | 1440..2596 | 37..1196 | 5155 | 97.3 | Plus |
Gr64e-RB | 1468 | CG32258-RB | 114..1182 | 125..1196 | 4715 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4034163..4034550 | 240..627 | 1940 | 100 | Plus |
3L | 28110227 | 3L | 4034610..4034885 | 627..902 | 1240 | 98.2 | Plus |
3L | 28110227 | 3L | 4034943..4035080 | 902..1038 | 445 | 92.9 | Plus |
3L | 28110227 | 3L | 4033765..4033852 | 37..124 | 440 | 100 | Plus |
3L | 28110227 | 3L | 4034033..4034107 | 166..240 | 375 | 100 | Plus |
3L | 28110227 | 3L | 4035165..4035252 | 1058..1145 | 255 | 91 | Plus |
3L | 28110227 | 3L | 4033937..4033977 | 125..165 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:20:56 has no hits.
FMO04303.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:00 Download gff for
FMO04303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr64e-RA | 1432..2581 | 32..1180 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:44:31 Download gff for
FMO04303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr64e-RA | 1432..2581 | 32..1180 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:57 Download gff for
FMO04303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr64d-RA | 1432..2581 | 32..1180 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:57 Download gff for
FMO04303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4033762..4033852 | 35..124 | 97 | -> | Plus |
3L | 4033937..4033977 | 125..165 | 100 | -> | Plus |
3L | 4034033..4034107 | 166..240 | 100 | -> | Plus |
3L | 4034164..4034550 | 241..627 | 100 | -> | Plus |
3L | 4034611..4034885 | 628..902 | 98 | -> | Plus |
3L | 4034944..4035098 | 903..1056 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:00 Download gff for
FMO04303.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4033762..4033852 | 35..124 | 97 | -> | Plus |
arm_3L | 4033937..4033977 | 125..165 | 100 | -> | Plus |
arm_3L | 4034033..4034107 | 166..240 | 100 | -> | Plus |
arm_3L | 4034164..4034550 | 241..627 | 100 | -> | Plus |
arm_3L | 4034611..4034885 | 628..902 | 98 | -> | Plus |
arm_3L | 4034944..4035098 | 903..1056 | 93 | -> | Plus |