Clone FMO04303 Report

Search the DGRC for FMO04303

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:43
Well:3
Vector:pMK33-CFH-BD
Associated Gene/TranscriptGr64e-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04303.5prime Sequence

1267 bp (1010 high quality bases) assembled on 2008-07-30

> FMO04303.5prime
CTTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGCCAGGACC
ACTGGGGATCCTGCCAAGCGACGCAGGTGCATGTCTCGCATCAAGTTCTG
GCGAAGATCGCGCGTGGGCAGCGAAGTCGTTGAAAAAGATACAAAGCGAT
TTAAGCTTTCCTTGATAAAAGCTTGGCTTCTTCGCATCAGACAGGAGGAT
TATAAGTACAGTGGATCTTTCCAGGAAGCCATCAAGCCTGTCCTCATAAT
CGCGCAGATCTTTGCTTTGATGCCAGTTCGAAAAGTGAGCTCCAAGTTCG
CAGAAGACCTAACCTTCACCTGGTTCAGCGTTCGATCCTATTACGCCCTG
GTAACCATCCTGTTTTTTGGTGTTAGCTCTGGATATATGGTGGCCTTTGT
GACAAGTGTGTCCTTTAATTTTGATTCGGTGGAGACCCTGGTCTTCTACT
TGTCCATATTCCTTATCTCTTTGTCGTTTTTTCAACTGGCCAGAAAGTGG
CCAGAAATAGCTCAGTCATGGCAGTTGGTGGAGGCCAAGTTGCCGCCTCT
GAAGTTGCCCAAAGAGCGCAGATCCCTGGCGCAGCACATTAACATGATCA
CCATCGTGGCCACCACTTGCTCGCTGGTGGAGCACATTATGAGCATGTTG
TCCATGGGCTACTATGTCAACTCCTGTCCCCGATGGCCAGATCGTCCCAT
AGACAGTTTCCTGTACTTGAGCTTCTCCTCGGTCTTCTACTTCGTGGACT
ACACACGCTTCCTGGGCATTGTGGGGCAAGTGGTCATGTGCTGAGCACCT
TCGCCTGGAACTTTAACGACATCTTTGTGATGGCAGTTAGCGTAGCTTTG
GGCTGCTCGCTTTCGTCAGCTTAATGACTACATGATGAGGGAGGCTAGAT
TGCCCACCACTGTGGACTATTGGATGCAGTGCAGGATTACTTTCGCAACC
TTTGCAAGCTGTGCGAAGAGGTGGACGATGCCATAATCCCACATTTACAT
TGCTCTGCTTCAGAACATCTGTACTTCATCTGCGGAAACTCCTAAAGGAG
TATGCAAGGCAAAGCCGTCTATATGGCATGCCCTGTACTCTGGGTCCTCG
CTGGTCACCTACCTGGTCGCAACCCTCATCCTGTCCCTGTACAGCCTCCA
GATAAATGGATGAGTCTAAGCCAACCCCTGCATAATCTTTCAATTGATCC
TGGAAAATTGTGCAGAGAGACTTAACGCTTCGCGAGAGAGAGGCTCCAAA
GATGGACAAATTGTTGT

FMO04303.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:57
Subject Length Description Subject Range Query Range Score Percent Strand
Gr64e-RA 2882 CG32258-RA 1440..2596 37..1196 5155 97.3 Plus
Gr64d-RA 2882 CG14987-RA 1440..2596 37..1196 5155 97.3 Plus
Gr64e-RB 1468 CG32258-RB 114..1182 125..1196 4715 97 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4034163..4034550 240..627 1940 100 Plus
3L 28110227 3L 4034610..4034885 627..902 1240 98.2 Plus
3L 28110227 3L 4034943..4035080 902..1038 445 92.9 Plus
3L 28110227 3L 4033765..4033852 37..124 440 100 Plus
3L 28110227 3L 4034033..4034107 166..240 375 100 Plus
3L 28110227 3L 4035165..4035252 1058..1145 255 91 Plus
3L 28110227 3L 4033937..4033977 125..165 205 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:20:56 has no hits.

FMO04303.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:00 Download gff for FMO04303.5prime
Subject Subject Range Query Range Percent Splice Strand
Gr64e-RA 1432..2581 32..1180 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:44:31 Download gff for FMO04303.5prime
Subject Subject Range Query Range Percent Splice Strand
Gr64e-RA 1432..2581 32..1180 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:57 Download gff for FMO04303.5prime
Subject Subject Range Query Range Percent Splice Strand
Gr64d-RA 1432..2581 32..1180 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:57 Download gff for FMO04303.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4033762..4033852 35..124 97 -> Plus
3L 4033937..4033977 125..165 100 -> Plus
3L 4034033..4034107 166..240 100 -> Plus
3L 4034164..4034550 241..627 100 -> Plus
3L 4034611..4034885 628..902 98 -> Plus
3L 4034944..4035098 903..1056 93 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:00 Download gff for FMO04303.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4033762..4033852 35..124 97 -> Plus
arm_3L 4033937..4033977 125..165 100 -> Plus
arm_3L 4034033..4034107 166..240 100 -> Plus
arm_3L 4034164..4034550 241..627 100 -> Plus
arm_3L 4034611..4034885 628..902 98 -> Plus
arm_3L 4034944..4035098 903..1056 93 -> Plus