FMO04304.5prime Sequence
473 bp (473 high quality bases) assembled on 2008-07-30
> FMO04304.5prime
ATACAAAAAGAAAAGTTATCAGTCGACATGTGTGACGTTTTTCCATCAGG
GAATGTGAGCCCACCACCTTGCGGCTTCCTTTCAACAGCTACCACATCAA
TTTTCCCCTATATATTTTGGACATGGTGCGCATCTTCCAGGATCATCCCA
AGTACAGCAATGGTATCCACGAGGAGCACATTCTGGAGATGCTGGAAAAG
GAACCCTTTGCCTGTGGCGATCTGGAGTCGCAGGTGAAGACCGCTCTGCT
GGACCTAACGGCCAAGGGATTCATACGCTTCATTACCAATTGATACCGCA
CCCTGGGACCCATCGCCAAGCTATCCAATGCCCGTTCCGCGCGTCACTTC
AACATGACATGGCAGCGCATTGCCGAGCTGCAGAAGGTCAACTGTCCGAG
CCTGGAGGCGGGATCCATCTCCAGCGGACCCTGCATACAGCGCGGAGCCA
ACTACGCAAGCTTTCTAGACCAT
FMO04304.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:39:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3687-RA | 708 | CG3687-RA | 160..570 | 45..455 | 1935 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:39:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16237089..16237341 | 203..455 | 1175 | 97.6 | Plus |
| 2R | 25286936 | 2R | 16236874..16237031 | 45..202 | 760 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:39:20 has no hits.
FMO04304.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:47 Download gff for
FMO04304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3687-RA | 157..581 | 42..465 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:46:56 Download gff for
FMO04304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3687-RA | 100..524 | 42..465 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:50 Download gff for
FMO04304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3687-RA | 157..581 | 42..465 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:50 Download gff for
FMO04304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16236871..16237031 | 42..202 | 98 | -> | Plus |
| 2R | 16237089..16237352 | 203..465 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:47 Download gff for
FMO04304.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12124376..12124536 | 42..202 | 98 | -> | Plus |
| arm_2R | 12124594..12124857 | 203..465 | 96 | | Plus |
