FMO04306.5prime Sequence
603 bp (603 high quality bases) assembled on 2008-07-30
> FMO04306.5prime
TACATAAAAAAGAAGTTATCAGTCGACATGTCCGGCAAACGACTTGCCTG
TATGGTGTCCTCCGCCAGTGTAATGCATTCGAGTGCATCGATCTCAAGCA
GGGCTCCAAAATCGAAAAAGCCCAAACTGCCGACCTTTGACCTGTCGCTA
AGCCAGAAGGTGGACATTAAGAAAGCCTTCGATTTGTTCGACACCCAGTG
CACGGGCTTTATCGAAACCAAGGAGCTTCGCGTGGCCATTCGTGCCCTGG
GATTCGAGCCGAAGAAAGAGGATATAAAGCGTATGATGGACGAAATCGAT
AAGGACAAGACGGGAAGGATTGCCTTTAACGATTTTCTATATCTGATGCG
CCTGAAGATGGCGGAAAAGGACTCTAATCAGGATATGATGAAGGCCTTTT
CCTTCTTCGATGACGATCGCACCGGCGGCATATCCTTCCTCAACTTGAAA
CGCGTGGCCAAGGAGCTGGGCGAACAGCTCACCGACGAGGAACTGCAGGA
GATGATCGACGAAGCCAACGTTTCCGGTGATGGTGAGGTTAGCAAGGAGG
AGTTTCTCAACCTTATCAAGAAAACCAATCTCATCGCAAGCTTTCTAGAC
CAT
FMO04306.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31802-RA | 823 | CG31802-RA | 89..647 | 27..585 | 2720 | 99.1 | Plus |
| CG17493-RD | 5997 | CG17493-RD | 384..598 | 163..377 | 190 | 72.6 | Plus |
| CG17493-RC | 1364 | CG17493-RC | 384..598 | 163..377 | 190 | 72.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18208591..18209149 | 585..27 | 2720 | 99.1 | Minus |
| 2L | 23513712 | 2L | 22550682..22550896 | 163..377 | 190 | 72.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:20 has no hits.
FMO04306.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:21 Download gff for
FMO04306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31802-RA | 79..652 | 18..593 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:51:53 Download gff for
FMO04306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31802-RA | 79..652 | 18..593 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:06 Download gff for
FMO04306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31802-RA | 79..652 | 18..593 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:06 Download gff for
FMO04306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18208586..18209149 | 27..593 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:21 Download gff for
FMO04306.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18208586..18209149 | 27..593 | 98 | <- | Minus |
