FMO04307.5prime Sequence
925 bp (925 high quality bases) assembled on 2008-07-30
> FMO04307.5prime
CGTATAGCATACATTAAACGAAGTTATCAGTCGACATGATTTCGCCAGGC
TATCAGAGGTTAGGCCCTTCCTTGGATCGAGTACCAGATGATGAGGAAAC
CGACTCACAGGAGGAGGAGATGGAAATACTGCCATGCGGAATGGGCGAGG
AGGGCATAACCACCGATGAGGAGACAAAAACCCTGATTACCATTCAGGGT
CTGGACGAGATATTGAAAAGAATCGATATATTGCGTAGTCAACTCCGCAG
GAATCAGCAATTGGAGGATATTAGCCAACCATCGGTAATGCCAGAGGATC
CGATCTCCTGCAGTGGCCTGAATGCGAAGCAATCGGAGATACGGTGCATT
CAACGTGCCCAGCATCACATTCAGTGCCAACTAACCGAACTCCTGTGCCG
CTACGATGCCCTCCGGAATATGTTGCGCAGTTTGGGCGAAACGTGGACGT
GTCTAGAGCGACGAATTGCCGATATTCGGGGACAGAACCGCGTCCACTTG
GCCTGGACTGAGGAGTGCGCCAACGATCTAAGCAACTGCCAGCAGAGACA
TCGCTCCTTGGCCGCCGTCAAGCTTACCAAAAAGATGGCCCTGCTCGTGA
CCAAAACGAATATGTCCAGTGGCTTTCGCTATAGCCGTCGATATCTACGA
CATGCCCTGATCGCTCGACATATCAACGACTTTCGCTACGAGATCGCCGA
GTTGAAGGTTTTAAGCGAGGAAATTTTCTCCGAAATCGATGGGCGACTGG
ACCAGATCAAAGATGAAGGCTCAACGATTCGGAGTCGTATTCTCGACCAC
GCCGCGTCAATCCAATCTAATCGCCGATGGAACTGGCAACACTGAGCTAA
CCGAGCTAACTGATGCCACCGAAACGTTCACCCGTTCCAAGGAGCAATAA
TCCAAAAGCAAGCTTTCTAGACCAT
FMO04307.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SIP3-RA | 1200 | CG15468-RA | 220..1089 | 36..907 | 4310 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4960040..4960909 | 907..36 | 4260 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:47:33 has no hits.
FMO04307.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:25 Download gff for
FMO04307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SIP3-RA | 215..1092 | 29..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:46:57 Download gff for
FMO04307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SIP3-RA | 87..964 | 29..911 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:24 Download gff for
FMO04307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SIP3-RA | 215..1092 | 29..911 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:24 Download gff for
FMO04307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4960037..4960914 | 29..911 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:25 Download gff for
FMO04307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4854070..4854947 | 29..911 | 99 | | Minus |
