Clone FMO04310 Report

Search the DGRC for FMO04310

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:43
Well:10
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9582-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04310.5prime Sequence

413 bp (174 high quality bases) assembled on 2008-07-30

> FMO04310.5prime
AACATACTGTCCGTTCACTGGCGCATTGGCAATTTTTGGCTGGCGGATTG
TCGGGCTTCATCTCAATTATCTGCTTTCCTCCCCTCGATGTGGTTAAGAC
CCGGATGCAGATACAGGGTGCCCATCCATTTGGCGGCGAGGTTGTTTACA
CCTGTCCTCTGGATGCCATCGTCAAAATATATCGCTACGAAGGGTTGTCT
TCCCTATGGAAGGGTATTGTGCCCCCGATCTGCGTGGAAACTCAAAAGAG
GGGCGGCAAGTTTTTGATGTACGAGAGCCTTAAACCGTACTTCCAGTTTG
GAGCCCCTCAACCAACTCCGCTGACCCACGCCATGTCCGGTTCAATGGCC
GCAATTCTGGAGTCCTTTCTCGTCAATCCCTTTGAGGTGGTCAAGATCAC
TCAGCAGGCTCAT

FMO04310.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG9582-RB 1287 CG9582-RB 265..669 9..413 1935 98.8 Plus
CG9582-RA 983 CG9582-RA 91..495 9..413 1935 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9024938..9025342 413..9 1935 98.5 Minus
Blast to na_te.dros performed on 2014-11-28 19:44:50 has no hits.

FMO04310.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:48 Download gff for FMO04310.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9582-RA 83..495 1..413 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:46:53 Download gff for FMO04310.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9582-RA 55..467 1..413 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:41 Download gff for FMO04310.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9582-RA 83..495 1..413 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:41 Download gff for FMO04310.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9024938..9025350 1..413 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:48 Download gff for FMO04310.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9024938..9025350 1..413 98   Minus