Clone FMO04316 Report

Search the DGRC for FMO04316

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:43
Well:16
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15676-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04316.5prime Sequence

587 bp (587 high quality bases) assembled on 2008-07-30

> FMO04316.5prime
ATAATACGAAGTTATCAGTCGACATGTTTGCATTCATAGACACCATAAAA
AAGCCGCCTCTGGGCGGCCGAAAGTCATTTATGCCCATCCCAGAGGCCAA
GTTAGTTGACGATGTCGTCAGCTACATCGCCAAGCCAGAGTTCTATTCGA
CTGTTCCAGCGGCATTGAAGATGCAACGCCTTTTCTATGTGCAATACAGC
GAACTGGCTGCCAAGTTGGAGACTGACCTCACAGCAGTGTTAACCCGTTT
GGAGGCTGCCAAAAATAATTTGGAATTGGTGAGGAGGTTCATAGACAATC
CTGACAAGGAAGTTCACAGCCTCGTGCAAATCGCACAGGGAGTATTCAGA
TGGGTGAGCATACCGCCAGTGCAAAAGGTTACCCTTCAAGTGGGCGCATC
TCTGCAAATGGAATTCGAGCTGTCCGAGGCGGAGGAGTTCATCAAAAAGG
ACATCACCAGCCTGGTGAAGCAGCAATTGCAACATGAGCACGATATCGAC
TATCTGCAGGATCAGGTGAACACGATTGAGATGAACCTAGCCGTATTGTA
TAAACATGAAGTGGAGAACGCAAGCTTTCTAGACCAT

FMO04316.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:06:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG15676-RB 1146 CG15676-RB 30..575 24..569 2730 100 Plus
CG15676-RA 644 CG15676-RA 30..575 24..569 2730 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:06:10
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21671729..21672274 24..569 2730 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:06:11 has no hits.

FMO04316.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:07 Download gff for FMO04316.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 24..575 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:02 Download gff for FMO04316.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 24..575 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:46 Download gff for FMO04316.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15676-RA 30..582 24..575 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:46 Download gff for FMO04316.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21671729..21672281 24..575 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:07 Download gff for FMO04316.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17559234..17559786 24..575 99   Plus