FMO04318.5prime Sequence
611 bp (194 high quality bases) assembled on 2008-07-30
> FMO04318.5prime
ATAGCATATCTAAAACGAAGTTATCAATCGACATGGAAAACTTCAATACC
TCTAATAATTCTGGAGTATCACAGCGAATCCTTAACACCGGGCCCACTCC
CGTACTCGCGCCCTCCGGATTAAGATCCCGCTTACTCAGCGGTTCCTCTG
AGCGGAATCCAAATGAGTATTACGGAGACTCGGACTCCTCAAGCAGCAGC
AGATCTATCGACAGAACCCCATTCCTGTTGGAGTATTCCAGCGACTCATA
GTCGTCTAATTCCAGTGATAGTGAAAGCTCATCGACCAACATTAGCTTCG
ATAGCAGTATTAGCTCCACCGAATCATCAACACCAATGGGACATACAGAA
TCCTCAGATTCAAACGAGGATTCTCCTCCCAACAAACGGATCAAATCAGA
TGACGAGGAGTCCTAGAAATCTGTCTTGCCCTACAACTGCCCTGTGTGCC
TGGAAGATGTCCCCAAGAAGCTACCAATGTCCACCAATTGTGGCCACGTT
TTCTGCAAAGCATGAATTAGAAGAGCTGTCGACACTGGCAGGGTATGCCC
ATTGTGCGGAGTGGATGAACCCGAATTCCATCGTATTTTCTTGGCAAGCT
TTCTAGACCAT
FMO04318.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| elfless-RC | 1376 | CG15150-RC | 226..786 | 33..593 | 2550 | 97 | Plus |
| elfless-RB | 1643 | CG15150-RB | 226..786 | 33..593 | 2550 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18010500..18010866 | 593..227 | 1640 | 96.5 | Minus |
| 2L | 23513712 | 2L | 18011077..18011194 | 150..33 | 530 | 96.6 | Minus |
| 2L | 23513712 | 2L | 18010934..18011011 | 227..150 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:03:42 has no hits.
FMO04318.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:37 Download gff for
FMO04318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RB | 222..790 | 28..598 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:51:55 Download gff for
FMO04318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RA | 12..580 | 28..598 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:35 Download gff for
FMO04318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| elfless-RB | 222..790 | 28..598 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:35 Download gff for
FMO04318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18010496..18010865 | 228..598 | 95 | <- | Minus |
| 2L | 18010934..18011011 | 150..227 | 100 | <- | Minus |
| 2L | 18011078..18011194 | 33..149 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:37 Download gff for
FMO04318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18010496..18010865 | 228..598 | 95 | <- | Minus |
| arm_2L | 18010934..18011011 | 150..227 | 100 | <- | Minus |
| arm_2L | 18011078..18011194 | 33..149 | 96 | <- | Minus |
