FMO04322.5prime Sequence
984 bp (966 high quality bases) assembled on 2008-07-30
> FMO04322.5prime
TAGCATACATTAAACGAAGTTATCAGTCGACATGGCGTACAGCATCGAAA
AGAAATCCATACCCGGCTACATGATGTACATCAATGGCGGTCTGGCCGGA
ATGCTGGGCACCTGCATTGTGCAGCCATTGGATTTGGTGAAGACCAGGAT
GCAGATATCAGCCACGACGGGCGAGTACAAGAGCTCCTTCGATTGCCTGC
TAAAGGTTTTTAAAAACGAGGGCATACTTGCGTTGTATAATGGATTGAGT
GCGGGATTGATGCGACAGGCCACGTACACGACAGCCCGAATGGGTTTCTA
CCAAATGGAGATCGACGCCTATCGCAAGCAGTTCAATGCACCGCCCACTG
TGTTGGCCAGCATGGGTATGGGCATTCTGGCCGGTGCTTTCGGTGCCATG
TTCGGCAATCCGGCGGAGGTGGCCCTCATCCGGATGATGTCCGATAACCG
ATTGCCGCCGGCGGAGAGGCGAAACTACACGGGTGTTTTGAACGCCTTTG
TGCGGATCGTCAAGGACGAGGGCGTGATCACCCTCTGGAAAGGATGCATG
CCCACTGTGGGTCGGGCCATGATCGTCAACATGGTTCAGCTGGCCTCGTA
CTCGCAGTTAAAGGCAGCATTTTCGGAATACTTTTCGGGACTTTCGCTTC
ACATCGCTGCCGCCATGATGTCCGGTCTATTGACCACCATTGCCTCAATG
CCACTGGACATGGCCAAAACGCGCATCCAGCAGCAAAAGACGGCCGAGTA
CAAAGGCACCATGGATGTCCTGATGAAGGTCTCCAAGAATGAGGGTATCG
CCTCCCTATGGAAGGGCTTCACGCTCTATTTGTGTCGCTTAAGACCGCAC
ACGGTGTTTTGCCTTTTATATTCCTGGAACAACTCACCAAGGCCTACAAG
CACATTGTGCTCGGCGACGATTCTGAATCGAACATCGGCAAGCTTTTCTA
GACCAGTTCGTTTGGGGGCGGGGGGCCCAGGTAG
FMO04322.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7514-RA | 1188 | CG7514-RA | 73..976 | 31..936 | 4270 | 98.2 | Plus |
| CG18418-RA | 1142 | CG18418-RA | 152..798 | 96..733 | 675 | 74.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4687799..4688702 | 936..31 | 4225 | 98 | Minus |
| 3L | 28110227 | 3L | 4689412..4689919 | 597..96 | 600 | 75 | Minus |
| 3L | 28110227 | 3L | 4689273..4689347 | 733..659 | 195 | 84 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:13:24 has no hits.
FMO04322.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:52 Download gff for
FMO04322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7514-RA | 62..984 | 20..947 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:00 Download gff for
FMO04322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7514-RA | 62..984 | 20..947 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:28 Download gff for
FMO04322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7514-RA | 62..984 | 20..947 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:28 Download gff for
FMO04322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4687790..4688713 | 20..947 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:52 Download gff for
FMO04322.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4687790..4688713 | 20..947 | 97 | | Minus |
