FMO04325.5prime Sequence
375 bp (375 high quality bases) assembled on 2008-07-30
> FMO04325.5prime
TGCCGCCTTCATCTATATGGTTTTCATACCCGTTGCAGGCATTGCAGCTC
TAAAGAGATCAGTGTGTCGTACTACACTGATCTCATATTTTTCGTTTATT
CCGCTATATTCATGGGCATCATGATGGACAGTTCGAAATTGAGTGACCGC
TTGGCTTTTATTGTCATCTCCTTGGTCGGTGGAAGTTTGAAATTTCTTCA
GATTTTCTTGACCATCGCCGCGGCCATTGTGTCCATTTTGGTGAATCCCA
CAATATCCGCTGCTTTTTGGATGAAGGTGTCCCAAGCCGTGATGGTGGAA
TACGATAATGGTGGTTTGATAAAATTAAACTCTGAAGAGAAGCCCTATGA
AATTGGATCCAAACCATATCCCACG
FMO04325.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7309-RC | 2093 | CG7309-RC | 303..678 | 1..375 | 1855 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10908282..10908476 | 194..1 | 925 | 99.5 | Minus |
| 2L | 23513712 | 2L | 10908114..10908229 | 310..195 | 580 | 100 | Minus |
| 2L | 23513712 | 2L | 10908013..10908062 | 359..310 | 250 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:13:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 7412..7471 | 287..228 | 110 | 68.9 | Minus |
| Dmir\spock | 4952 | Dmir\spock SPOCK 4952bp Derived from AY144571. | 846..891 | 286..240 | 106 | 72.3 | Minus |
FMO04325.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:40 Download gff for
FMO04325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7309-RC | 303..678 | 1..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:44:37 Download gff for
FMO04325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7309-RB | 220..595 | 1..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:16 Download gff for
FMO04325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7309-RC | 303..678 | 1..375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:16 Download gff for
FMO04325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10907935..10907950 | 360..375 | 100 | <- | Minus |
| 2L | 10908013..10908062 | 310..359 | 100 | <- | Minus |
| 2L | 10908115..10908229 | 195..309 | 100 | <- | Minus |
| 2L | 10908282..10908476 | 1..194 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:40 Download gff for
FMO04325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10908282..10908476 | 1..194 | 99 | | Minus |
| arm_2L | 10907935..10907950 | 360..375 | 100 | <- | Minus |
| arm_2L | 10908013..10908062 | 310..359 | 100 | <- | Minus |
| arm_2L | 10908115..10908229 | 195..309 | 100 | <- | Minus |
