FMO04331.5prime Sequence
1081 bp (1066 high quality bases) assembled on 2008-07-30
> FMO04331.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGAACGACTGCGCT
CCTCCCAAAACCGCGAAGTGCGAATCGGCAACTATAAGGTGGTGCGCAAG
ATCGGCTGTGGATCCTTCGGCGATATATATCTGGGCATCTATATCCACAG
TGGGGAGCGGGTGGCCATCAAGGTGGAAAGCAGCAAGGTGCGCCATCCGC
AGCTCAACTACGAGAGGCGAATCTACCGCGCCCTGAGGCCCGCCCACGGT
TTGCCAAGGATTAGGTACTTCCACAAGGAGGAGCACTACCAGGCGATGGT
TATGGATCTGCTTGGTCCCTCGCTGGAGAGACTCTTTCAGTTCTGCGAAA
GGGCATTCACCATCAAGACCGTTCTGCTTCTGGCCGAACAGATGCTTCGC
CGGGTGGAGTATGTCCATAACCGGGGATTCCTGCACCGCGACATCAAGCC
GGATAACTTCCTGATGGGTCTGGGTACCATGTCCAAGCAAGTGTACCTCA
TCGATTTCGGGCTATCCAAGAAGTATCTGGACATAACCACTGGTGTCCAT
ATACCATATCGCGAGGAGCGTTCCTTGACGGGAACAGCCAGGTACGCCTC
CATTGGCGCCCATGCCGGCGTCGAATCCGCCAGAAGGGATGACATGGTGG
CCGTTGGCTATGTCCTTATGTACTTCAATCGGGGATCACTGCCGTGGCAG
GATTTAAAGGCGTCCACCAAGCAGCAGAAATATGAACGCATACATGAGAA
AAAGATCTCGGTAAGCATTGAGGTACTTTGCGAGGGATTTCCCTGCGAGT
TCACAATGTACTTAAACTACTGCCGCGGCATGGGATTCTACGATAAGCCC
AACTACGACTTCATCTGCCGCATGTTTCGGATGCTGCGGAAGGTCTCAAT
CTTCGGCCGGGTCTCATCTACGACTGGGACATGCTGATGATGAAGTTCCA
CATACTCAGAAAATCCTGGCATTGGAATGCGTTGTATTTCCACTAAACAG
AAGAAGATGATGGTATCAGCGGTGACGCGATCATCAAAGATGAAGAGTGC
AACTTCTGGCGCAAGCTTCTAGAACCATTCG
FMO04331.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2577-RA | 1331 | CG2577-RA | 128..1157 | 35..1060 | 4945 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12373245..12374274 | 35..1060 | 4795 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:03:26 has no hits.
FMO04331.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:27 Download gff for
FMO04331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2577-RA | 121..1157 | 27..1060 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:09 Download gff for
FMO04331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2577-RA | 28..1064 | 27..1060 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:37 Download gff for
FMO04331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2577-RA | 121..1157 | 27..1060 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:37 Download gff for
FMO04331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12373238..12374274 | 27..1060 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:27 Download gff for
FMO04331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12267271..12268307 | 27..1060 | 98 | | Plus |
