FMO04333.5prime Sequence
563 bp (563 high quality bases) assembled on 2008-07-30
> FMO04333.5prime
CTTCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGTTTACTACA
CTGATGTATCGAACTGCAGCGGTCTCGATGACCGTCTACATAACCAATCG
AGTTGGAGTTTGGGGTAAGACAGAGGAGACGGACCACCTGCTCGATCAGA
TCACCAATGGTCTTCAACCAGTATTTGGACTTCTGCGACGAACGCTGAAG
TTAGATGAGAGCGATCTGAGCGTGGGTGAGCTATCCCGGAAATACTACAA
TGAAGGAGTGAAGGGCACTTTTCGTATCATTCGAAACATACCCAACTATT
CGGAGGAATTGGCCGACGGTGCCAAGGTCACCTGTCTGGATTTGGTGGAA
AAGGCCAAGGAATTGCGTCACAAAGAATATTCAAAATGGTGGAATACTTC
CACAAATAAGGAGCAACTGATTATTGATTCACCAGATTCTGCAGCTGGCG
ATGGATCTTTCGAGGATTTAGTCCCATTTGAGAAACCAAAGACCGTAGAT
AATTTTGCGGGGGAAGAGGGAAATGGAGCTCTTGAACAGAGGGTTGCAAG
CTTTCTAGACCAT
FMO04333.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15296-RB | 686 | CG15296-RB | 40..546 | 39..545 | 2535 | 100 | Plus |
| CG15296-RA | 690 | CG15296-RA | 44..550 | 39..545 | 2535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10565982..10566488 | 545..39 | 2535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:42:44 has no hits.
FMO04333.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:35 Download gff for
FMO04333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15296-RA | 35..553 | 30..549 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:44:41 Download gff for
FMO04333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15296-RA | 3..521 | 30..549 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:41 Download gff for
FMO04333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15296-RA | 35..553 | 30..549 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:41 Download gff for
FMO04333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10565978..10566497 | 30..549 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:35 Download gff for
FMO04333.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10460011..10460530 | 30..549 | 98 | | Minus |
