FMO04336.5prime Sequence
904 bp (904 high quality bases) assembled on 2008-07-30
> FMO04336.5prime
TCGTATAGCATACATAATACGAAGTTATCAGTCGACATGATAATAATGTC
TGATTCGAAAGCGGAGTACAACTGGGGCGATTTGGGTGTGGAGTCGATGG
AGAGCTTTGCATCCGCAATAAGTGAGGAGTTTCCCAGACTCCAACAGCAT
CGTGAGCAGGTGGAGCAGCTGCAGCGACGCGGCAGGCAGATTGTCAGCCA
GGCCCAGCAGCATTCTCAGGTTTTGGTCTCCAATCTGTTCAAGAATATGA
AGATCTCGTGCGAGAAGCCCACATTTCCACCGCAGGTGTCGGCTCCAAAG
GCCTATCGCTTCAAGGACATCTATTCCAGTCGCAAGGATCAGCTGATCCG
CGAATGCAGGGAGCAGGAGCGCAAGCAGCGCGAGTTCCACAGCCGACCGA
TGCCCGACTTTCGTCAGGCGCACTCACGTCAGTCCTCCAGGGTCGTTGTG
CATCGGATCACCTGCCCCACGACCCCCAATGTGCTCAAGAATTCGCGTGA
AATGGAGGAAAAGCGCCGCTTGCGGGTGGAGCAGCTGCAGAGGGAGCGCG
AGCTGGAGTCCCAACTTCACAAAATGCAGGCTCCTAGGGCCAAACCGATT
CCGCAGAGCAGCCGTCAGCCCTTGAAGTCCTCGAACCGACCTTCCTCCGC
AGTTCCAGCGGCAAGGGTGAAGGTCGAGCCCTTCAACTTGTCCGCCGAAA
TCGCGCGTCCAGCAGCGGCGCATTTTCAACATCCAGACGTCCAAGGCGCA
CGAGGCGCGGCGCCGCGAGCTGGAGGATCAGCGCCAACGGGCGGAACGGG
AGGCCTACCAAAAGCTGCGCCAACGAACCACGTTCCGCGCCAGACCCAAT
CCATTTTCGCAGACCGCACGTGCAAGCTTTCTAGACCATTCGTTTGGCCG
CGCG
FMO04336.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15395-RB | 1234 | CG15395-RB | 165..998 | 37..871 | 4135 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2610476..2611047 | 299..871 | 2800 | 99.7 | Plus |
| 2L | 23513712 | 2L | 2610158..2610422 | 37..301 | 1325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:40:13 has no hits.
FMO04336.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:04 Download gff for
FMO04336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15395-RB | 154..1004 | 27..878 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:42:06 Download gff for
FMO04336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15395-RB | 1..852 | 27..878 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:19 Download gff for
FMO04336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15395-RB | 154..1004 | 27..878 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:19 Download gff for
FMO04336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2610147..2610421 | 27..300 | 98 | -> | Plus |
| 2L | 2610478..2611053 | 301..878 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:04 Download gff for
FMO04336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2610147..2610421 | 27..300 | 98 | -> | Plus |
| arm_2L | 2610478..2611053 | 301..878 | 98 | | Plus |
