FMO04337.5prime Sequence
419 bp (419 high quality bases) assembled on 2008-07-30
> FMO04337.5prime
TACATAAAACAAAGTTATCAGTCGACATGGGCGGCGAGGCCATGGAAAAA
TCTGAAGGCGGCGATCAGCCGGAGAGTGCTGGCGAGAAGGAGCAGGTGCA
TCAAGGAGCAGACCAACAGGTTCAACGGGAAAAGCGTCGTCAAAGTGTGT
CTCCTGATGGGGGCGATGTAGGCAGTGTAAAGATGGCTGATGTGGTTTTA
GAAGGCGCATCGGATGTTGCCGTAACTAAGAAGCGGGTAAACATTAACCA
CAACACATCATCATCGCATCGCCACTCTTGTTTTCCTCACAAAATACATT
CTCACTCGGCCGATTCGATACGTATTCTTGGCAACAGTTGTACAGTTGAC
GGTGCTCTGCTAAAGCCGAAAAAACGCCACTCAACGCCACACAGCGAATG
CGCAAGCTTTCTAGACCAT
FMO04337.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43675-RB | 1628 | CG43675-RB | 1193..1567 | 27..401 | 1845 | 99.5 | Plus |
| CG43675-RC | 1820 | CG43675-RC | 1385..1759 | 27..401 | 1845 | 99.5 | Plus |
| CG45050-RI | 2529 | CG45050-RI | 1193..1402 | 27..236 | 1035 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9357246..9357620 | 27..401 | 1845 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:45:00 has no hits.
FMO04337.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:54 Download gff for
FMO04337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33937-RA | 1032..1409 | 27..405 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:12 Download gff for
FMO04337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33937-RB | 1091..1468 | 27..405 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:45 Download gff for
FMO04337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43675-RC | 1385..1762 | 27..405 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:45 Download gff for
FMO04337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9357243..9357623 | 25..405 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:54 Download gff for
FMO04337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5182965..5183345 | 25..405 | 98 | | Plus |
