FMO04342.5prime Sequence
799 bp (799 high quality bases) assembled on 2008-07-30
> FMO04342.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAACAAAAAAC
CAGAATACAAGCTAAGCGAGCGCGACTTAGACATCCGCTCTGATCTGGAG
TTCGTAGATGGTATGCTGAAGGACCTGCAATTGGAGGTGGAGCCGCAGGC
TCGTGGGGTCATCTTGGATCTGGCTTATACTTTGGCAAGGGACAAACTCG
TCGAGGCTCAACGTTTCGCAAAGTTGGTCAATCGCACCAAAGTGAGTATC
GAGGACTTGAAGATGGCCAACCTGGAGCGGACAGAGGAGCTGAGCAAGAG
AGCGATCCATACGCCGGTGAAGTCCCTTATTCCCAGCCAGGCATCTCTGC
CCTCGCCGACTGTGAGCCGTGGACTGATGCTGCCCACCTGGCGGCAGTGT
CAGATGGGTACAATGGCCGAATTGAAGGACAAGGTCCCTGAGACTCAGCC
ACCGAATCCCAAGCCCGTGCCGCCCCTAACACCGGTAACAGCTTCTACTC
CTGGTCTAAACTCTGGCTCCAATTCGATGCTGACTACTGGATCTTCAAGC
CCGGGTCTTAAGGCTTCACACTCCCTTGCTCCTCCCATTGGCACCAAGGC
GAATCTTTTCGACAATTTTACCTTGCCAACGATTTTACCCGATAGAGTTC
GCAAGGATGCTCGTGGTAGCGCAATAAGAAGTCATTCTACTCCTAGGATG
TACATCAATAGATCCTATAGCTCGATGGCTGACGCAGCAGGAGGATCTCC
CTCGGTCACAAAGAAACCACGCATGCAACTAGCAAGCTTTCTAGACCAT
FMO04342.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14930-RA | 866 | CG14930-RA | 27..770 | 38..781 | 3705 | 99.9 | Plus |
| CG14929-RA | 1515 | CG14929-RA | 527..1126 | 779..180 | 2985 | 99.8 | Minus |
| CG14929-RA | 1515 | CG14929-RA | 1189..1330 | 179..38 | 710 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11520454..11521055 | 781..180 | 2995 | 99.8 | Minus |
| 2L | 23513712 | 2L | 11521118..11521259 | 179..38 | 710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:28:16 has no hits.
FMO04342.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:25:02 Download gff for
FMO04342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14930-RA | 22..774 | 32..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:47:14 Download gff for
FMO04342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14930-RA | 22..774 | 32..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:13:12 Download gff for
FMO04342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14930-RA | 22..774 | 32..785 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:13:12 Download gff for
FMO04342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11520449..11521055 | 180..785 | 99 | <- | Minus |
| 2L | 11521118..11521264 | 32..179 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:25:02 Download gff for
FMO04342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11520449..11521055 | 180..785 | 99 | <- | Minus |
| arm_2L | 11521118..11521264 | 32..179 | 97 | | Minus |
