FMO04344.5prime Sequence
626 bp (626 high quality bases) assembled on 2008-07-30
> FMO04344.5prime
CGTATAGCATACATTAAACGAAGTTATCAGTCGACATGCGCATTCAAACG
TGCTATTTTTGCTCTAGCAAAATATACCCGGGCCACGGGGTGCAATTCGT
GCGAAATGACTGCAAGGTCTTCAAGTTCTGCCGAGGCAAGTGTCACAAGG
CCTTTAAGCGCAAGAAGAATCCCCGCAAGGTAGGATGGACGAAGGCGTAC
CGCAAGGCCGCCGGCAAGGAGCTGGCCATCGATCCCAGTTTCGAGTTCGA
GAAGCGCCGCAACGTGCCCATGAAATACAGCCGCGAGACCTGGCAGAAGG
GTCTGGAGGCCATCAAGCGGGTGACGGAGATTAAGGAGAAACGCACCAGC
CACTTTGTCATGGAGCGACTGCGCAAGGGTCGCCAGGTCGAGATTCAGAT
GGACGTCAAGGATGTGCAGCGCAACATGTCCCTGATTCGCTCCCCAGCCG
CAGGGCTGAAGCAACGACGTGCCCAGGAGGCGGCAGAGGAGGCCGCCCTC
ATGGAGGAGGATCTGCCCGAGGAGAAGATCACCTACGTGGATGCACGCGA
ACTCGAGAAGAAACTGGAGGAGGGAATGGGGGTCGAGGATCTCGAGATGT
TAGAAGCCGCAAGCTTTCTAGACCAT
FMO04344.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL24-like-RA | 773 | CG6764-RA | 94..666 | 36..608 | 2865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11430847..11431340 | 608..115 | 2470 | 100 | Minus |
| 3R | 32079331 | 3R | 11431407..11431489 | 118..36 | 415 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:17:09 has no hits.
FMO04344.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:02:32 Download gff for
FMO04344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL24-like-RA | 94..670 | 36..613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:52:00 Download gff for
FMO04344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6764-RA | 187..763 | 36..613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:50 Download gff for
FMO04344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL24-like-RA | 94..670 | 36..613 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:50 Download gff for
FMO04344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11430843..11431338 | 117..613 | 99 | <- | Minus |
| 3R | 11431409..11431489 | 36..116 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:02:32 Download gff for
FMO04344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7256565..7257060 | 117..613 | 99 | <- | Minus |
| arm_3R | 7257131..7257211 | 36..116 | 100 | | Minus |
